Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  313 bits (801), Expect = 1e-89
 Identities = 203/559 (36%), Positives = 291/559 (52%), Gaps = 45/559 (8%)

Query: 2   LLKIDNLKVEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGLR 61
           LL +  L V   G  G    + G++L ++RGE + L+GESG GKST  LA L     G  
Sbjct: 13  LLDVRGLDVFFLGSNGPVQAVRGLDLTLQRGETLALVGESGCGKSTTALALLRLLAPGAV 72

Query: 62  FAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGTA 121
             G  +  +  D+L L+  +    RGR ++ + Q    S NP   +  Q  E    H   
Sbjct: 73  LRGS-IQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEETLRRHEKL 131

Query: 122 SRPDCEILARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPTT 181
           S       A +L   +++P+        PH +SGGQ QR M+AMA+ACKP L+V DEPTT
Sbjct: 132 SALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVADEPTT 191

Query: 182 ALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQIM 241
           ALDVT Q  +L  +       + A + ITHDL +VAQ ADR+ VM  G +VEEA T ++ 
Sbjct: 192 ALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEASTSRLF 251

Query: 242 QSPREDYTR-----SLWAVREFHRPERRL------------ERNDA-------------- 270
            +P   YTR     SL A    H  + RL            ER+ A              
Sbjct: 252 AAPSHAYTRGLLGASLHAGSALHYVDARLPEIQTRLDAATGERSFALHVPEPNSKVRALP 311

Query: 271 -------PVISINNVTASY-----GHFDVLRDVAFEIPRGATVAVVGESGSGKSTAARVV 318
                  P++S+ ++   Y     G    +  V+F+I  G TV +VGESG GKST +R +
Sbjct: 312 VRTAAAEPLLSVQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTL 371

Query: 319 TGLLPPRIGSITLNGEVLPPSFSRRSREQLRKIQMIYQMADTALNPRQSIRQILCRPLQF 378
             L+ P  G I  +G  +     +  +   R++QM++Q    +LNPR+S+  I+   L+ 
Sbjct: 372 LRLVNPASGRIVFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIESVLKV 431

Query: 379 YVGLKGAALERRLGELMEQIELSPRQFLHRVPGELSGGQKQRIGIARALAANPEIIICDE 438
           +     A    R+  ++E++ L P     R P E SGGQ+QRIGIARAL   P +++ DE
Sbjct: 432 HGVADRAERRNRIAAILERVGL-PADAGRRFPNEFSGGQRQRIGIARALVLRPSLVVLDE 490

Query: 439 VTSALDQLVAEGILRLLSRLQDETGISYMFITHDIDTVRAIADDVVVMKSGTVQDKGSKA 498
             SALD  V   IL LL  L+++ G+SY+FI+HD+  VR IAD V+VM  G + + GS  
Sbjct: 491 PVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGSHR 550

Query: 499 EVMDPPRHHYTRQLLASVP 517
           ++ D P+H YTR L+A+VP
Sbjct: 551 DIWDRPQHPYTRSLIAAVP 569