Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  328 bits (842), Expect = 2e-94
 Identities = 193/524 (36%), Positives = 294/524 (56%), Gaps = 9/524 (1%)

Query: 2   LLKIDNLKVEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGLR 61
           L+++ +L V        S  L  ++  + +GE + ++GESG+GKSTL  A LG      R
Sbjct: 6   LIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLLPGNAR 65

Query: 62  FAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGTA 121
              G++ V+ VD+ + +ER R   RGR +  V Q    S NP  ++  Q  E   +    
Sbjct: 66  IDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEALQLARGR 125

Query: 122 SRPDCEILARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPTT 181
             P  E     L   + L + A    ++PH++SGG  QR ++A+A+A +P LI+ DEPT+
Sbjct: 126 RYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRLIIADEPTS 185

Query: 182 ALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQIM 241
           ALDVT Q  +L  ++  V     + + ITHDL +    ADR+ VM+ G +VE    RQI+
Sbjct: 186 ALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHGSPRQIL 245

Query: 242 QSPREDYTRSLWAVREFHRPERR--LERNDAPVISINNVTASY------GHFDVLRDVAF 293
              R+ YTR+L        P RR    R   P++ +++V   +       H+  L D++ 
Sbjct: 246 WGARQPYTRALLDAAPAFVPRRRPAAPRGQTPLLRLSHVGKRFELPGKNEHYTALHDLSL 305

Query: 294 EIPRGATVAVVGESGSGKSTAARVVTGLLPPRIGSITLNGEVLPPSFSRRSREQLRKIQM 353
           E+  G T+A+VGESGSGKSTA R+  GL  P  G +   GE +      + R   R+IQ+
Sbjct: 306 ELHAGQTLAIVGESGSGKSTALRIALGLEKPSQGQVVFAGEDVTGYTWSQFRPLRRRIQL 365

Query: 354 IYQMADTALNPRQSIRQILCRPLQFYVGLKGAALERRLGELMEQIELSPRQFLHRVPGEL 413
           + Q    AL+PR ++   +  PL  +  L+G ALER+  EL+ +++L P QFL R+P EL
Sbjct: 366 VQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALERKARELITRVQL-PVQFLDRLPREL 424

Query: 414 SGGQKQRIGIARALAANPEIIICDEVTSALDQLVAEGILRLLSRLQDETGISYMFITHDI 473
           SGGQ+QR+ IARALA  PE+++ DE  SALD  V   IL LL  LQ E G++Y+ ++HD+
Sbjct: 425 SGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELGMAYVLVSHDL 484

Query: 474 DTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHYTRQLLASVP 517
             V ++AD V+V++ G V ++G   +V+      YTR L+ ++P
Sbjct: 485 AVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDAIP 528



 Score =  148 bits (373), Expect = 6e-40
 Identities = 102/265 (38%), Positives = 144/265 (54%), Gaps = 12/265 (4%)

Query: 268 NDAPVISINNVTASYG----HFDVLRDVAFEIPRGATVAVVGESGSGKSTAARVVTGLLP 323
           + +P+I + +++ SY         LR ++F + +G T+AVVGESGSGKST A  + GLLP
Sbjct: 2   SQSPLIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLLP 61

Query: 324 PRI----GSITLNGEVLPPSFSRRSREQLR--KIQMIYQMADTALNPRQSIRQILCRPLQ 377
                  G + ++G  +  + S R+R QLR   I ++ Q    +LNP Q I Q +   LQ
Sbjct: 62  GNARIDQGQLWVDGVDMAQA-SERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEALQ 120

Query: 378 FYVGLKGAALERRLGELMEQIELS-PRQFLHRVPGELSGGQKQRIGIARALAANPEIIIC 436
              G +    E ++  L++Q+ L  P     + P ELSGG +QR+ IA ALA  P +II 
Sbjct: 121 LARGRRYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRLIIA 180

Query: 437 DEVTSALDQLVAEGILRLLSRLQDETGISYMFITHDIDTVRAIADDVVVMKSGTVQDKGS 496
           DE TSALD  V   IL  L  L  E GIS + ITHD+      AD ++VMK G   + GS
Sbjct: 181 DEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHGS 240

Query: 497 KAEVMDPPRHHYTRQLLASVPQMDP 521
             +++   R  YTR LL + P   P
Sbjct: 241 PRQILWGARQPYTRALLDAAPAFVP 265