Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

 Score =  293 bits (749), Expect = 1e-83
 Identities = 180/524 (34%), Positives = 285/524 (54%), Gaps = 15/524 (2%)

Query: 2   LLKIDNLKVEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAG-L 60
           LL+I +L +  +       ++  ++L +  GE + L+GESG+GKS   L+ L    +  +
Sbjct: 6   LLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLLPSPPV 65

Query: 61  RFAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGT 120
            +  G +L     LL  +E+     RG R+A + Q    S NP   +  Q  E  ++H  
Sbjct: 66  VYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLSLHRG 125

Query: 121 ASRPDCEILARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPT 180
             R             + +  AA     FPHQ+SGG+ QR M+AMA+  +PDL++ DEPT
Sbjct: 126 MRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLIADEPT 185

Query: 181 TALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQI 240
           TALDVT Q  +L  +    +      ++ITH+L +V ++ADR+ VM+ GR VE+  TR++
Sbjct: 186 TALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNRTREL 245

Query: 241 MQSPREDYTRSLWAVREFHRPERRLERNDAPVISINNVTASY-----------GHFDVLR 289
             +P+  YTR L    E       LE   + ++ +  +  S+           G   VL+
Sbjct: 246 FSAPQHPYTRQLLNA-EPTGEAPPLEPTASTLLDVRELGVSFPIRRGLLRRTVGEKSVLQ 304

Query: 290 DVAFEIPRGATVAVVGESGSGKSTAARVVTGLLPPRIGSITLNGEVLPPSFSRRSREQLR 349
            ++F + RG ++ +VGESGSGKST    +  LL  R G I  +G+ L     ++     R
Sbjct: 305 ALSFSLRRGESIGLVGESGSGKSTTGLALLRLLRSR-GEIWFDGQPLHRFNHKQMLPVRR 363

Query: 350 KIQMIYQMADTALNPRQSIRQILCRPLQFYVGLKGAALERRLGELMEQIELSPRQFLHRV 409
           +IQ+++Q  + +LNPR ++ QI+   L+ +  L  A   +R+ + M+++ L P    HR 
Sbjct: 364 RIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHPLSPAEQTQRVIQSMQEVGLDP-DSRHRY 422

Query: 410 PGELSGGQKQRIGIARALAANPEIIICDEVTSALDQLVAEGILRLLSRLQDETGISYMFI 469
           P E SGGQ+QRI IARAL   PE++I DE TS+LD+ V   IL LL  LQ    ++Y+FI
Sbjct: 423 PSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQTHQLAYLFI 482

Query: 470 THDIDTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHYTRQLL 513
           +HD+  VR++   V+V++ G V ++G   ++ + P+  YTRQLL
Sbjct: 483 SHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526



 Score =  141 bits (355), Expect = 7e-38
 Identities = 96/261 (36%), Positives = 149/261 (57%), Gaps = 17/261 (6%)

Query: 271 PVISINNVTASYGHF----DVLRDVAFEIPRGATVAVVGESGSGKSTAARVVTGLLP-PR 325
           P++ I +++ ++ +      V+  V+  I  G T+A+VGESGSGKS  A  V  LLP P 
Sbjct: 5   PLLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLLPSPP 64

Query: 326 I----GSITLNGEVLPPSFSRRSREQLR--KIQMIYQMADTALNPRQSIRQILCRPLQFY 379
           +    G I   GE L  +  +R R Q+R  +I MI+Q    +LNP  +I + L   L  +
Sbjct: 65  VVYLHGDILFAGESLLNASEQRLR-QVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLSLH 123

Query: 380 VGLKGAALERRLGELMEQIELSPRQFLHRV---PGELSGGQKQRIGIARALAANPEIIIC 436
            G++  A    +   +E++ +  RQ   R+   P +LSGG++QR+ IA AL   P+++I 
Sbjct: 124 RGMRRDAARGEIVGCLERVGI--RQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLIA 181

Query: 437 DEVTSALDQLVAEGILRLLSRLQDETGISYMFITHDIDTVRAIADDVVVMKSGTVQDKGS 496
           DE T+ALD  V   IL LL+ L+ E  +  +FITH+++ VR +AD V VM++G   ++  
Sbjct: 182 DEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNR 241

Query: 497 KAEVMDPPRHHYTRQLLASVP 517
             E+   P+H YTRQLL + P
Sbjct: 242 TRELFSAPQHPYTRQLLNAEP 262