Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 597 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  302 bits (774), Expect = 2e-86
 Identities = 186/554 (33%), Positives = 289/554 (52%), Gaps = 34/554 (6%)

Query: 2   LLKIDNLKVEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGLR 61
           +L+I+ L    +    W  ++  ++ E+   E V L+GESG+GKS   L+ +        
Sbjct: 5   VLRIEQLNTAFRVNGEWLNVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLLAGPQV 64

Query: 62  FAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGTA 121
              GR L +  DLL L  RE    RG R+  V Q    S NP  ++  Q  E    H   
Sbjct: 65  RTTGRALFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLRRHRGM 124

Query: 122 SRPDCEILARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPTT 181
                   A +L   +++P A +    +P   SGG  QR ++A+A+AC P L++ DEPTT
Sbjct: 125 DHAGARAEAVRLLEKVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACHPRLLIVDEPTT 184

Query: 182 ALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQIM 241
           ALDVT Q  +L  I++  +    + ++ITHD+ VVA++ADR  VM HG  VE A TR++ 
Sbjct: 185 ALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMADTRRLF 244

Query: 242 QSPREDYTRSLWAV--REFHRPERRLERNDA--------------------PVISINNVT 279
           ++P+  Y+++L++   R     + RL R  A                    PV+++  + 
Sbjct: 245 RAPQHPYSKTLFSALPRLGDMADSRLPRRFALFGQSAAASAPLADTVTPGEPVLAVRGLI 304

Query: 280 ASY-----------GHFDVLRDVAFEIPRGATVAVVGESGSGKSTAARVVTGLLPPRIGS 328
             +           G    + +V+F +  G T+++VGESG GKSTA R +  LL P  G+
Sbjct: 305 KRFEVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLEPNGGA 364

Query: 329 ITLNGEVLPPSFSRRSREQLRKIQMIYQMADTALNPRQSIRQILCRPLQFYVGLKGAALE 388
           ++L GE +  + +        + QMI+Q    +LNPR ++   +  P+  +         
Sbjct: 365 VSLCGENMLAAGASALAGLRMRAQMIFQDPYDSLNPRLTVGCAIAEPMISHGLASARQAR 424

Query: 389 RRLGELMEQIELSPRQFLHRVPGELSGGQKQRIGIARALAANPEIIICDEVTSALDQLVA 448
           +++ EL+E++ L       R P + SGGQ+QR+ IARALA NP +II DE  SALD  V 
Sbjct: 425 QKVAELLEKVGLQ-ADMAERYPHQFSGGQRQRLCIARALALNPRVIIADEAVSALDMTVK 483

Query: 449 EGILRLLSRLQDETGISYMFITHDIDTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHY 508
             I+ LL  LQ + G++Y+FI+HD+  V  I+  V VM  G + + G +  V + P+H Y
Sbjct: 484 AQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDPQHPY 543

Query: 509 TRQLLASVPQMDPD 522
           TR+LLA+VP  DP+
Sbjct: 544 TRRLLAAVPVPDPE 557



 Score =  117 bits (293), Expect = 1e-30
 Identities = 77/247 (31%), Positives = 119/247 (48%), Gaps = 7/247 (2%)

Query: 22  LHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGLRFAGGRVLVENVDLLRLTERE 81
           +  ++  ++ GE + L+GESG GKST G A L          GG V +   ++L      
Sbjct: 324 VENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLEPN----GGAVSLCGENMLAAGASA 379

Query: 82  RSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGTASRPDCEILARQLYASMQLPD 141
            +  R  R   + Q    S NP   +     E    HG AS         +L   + L  
Sbjct: 380 LAGLR-MRAQMIFQDPYDSLNPRLTVGCAIAEPMISHGLASARQARQKVAELLEKVGLQ- 437

Query: 142 AANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPTTALDVTTQIGVLTAIRSAVET 201
            A+   R+PHQ SGGQ QR  +A A+A  P +I+ DE  +ALD+T +  ++  +    + 
Sbjct: 438 -ADMAERYPHQFSGGQRQRLCIARALALNPRVIIADEAVSALDMTVKAQIVNLLLDLQQQ 496

Query: 202 SETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQIMQSPREDYTRSLWAVREFHRP 261
              A ++I+HD+AVV +++ R+ VM  G  VE  P + +   P+  YTR L A      P
Sbjct: 497 LGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDPQHPYTRRLLAAVPVPDP 556

Query: 262 ERRLERN 268
           E+R+ R+
Sbjct: 557 EKRVRRS 563