Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  342 bits (877), Expect = 2e-98
 Identities = 201/530 (37%), Positives = 306/530 (57%), Gaps = 18/530 (3%)

Query: 2   LLKIDNLKVEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGL- 60
           LL++ NL V+     G    +  I+  V RGE + ++GESG+GKS    A +        
Sbjct: 5   LLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPG 64

Query: 61  RFAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGT 120
           + + G +L+   DLL+++  +R A  GR +A + Q   +  NP + +  Q  E    HG 
Sbjct: 65  KISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTHGI 124

Query: 121 ASRPDCEILARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPT 180
            +R   ++ A +L+  + LP+      ++PH+ SGGQ QR M+AMA+A KP+L++ DEPT
Sbjct: 125 DNR-QAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADEPT 183

Query: 181 TALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQI 240
           TALDVT Q  VL  ++     +    + ITHDL VV+++ADR+ VM  G  VE    R++
Sbjct: 184 TALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVREV 243

Query: 241 MQSPREDYTRSLWAVR----EFHRPERRLERNDAPVISINNVTASYGHFDVLRDVAFEIP 296
            ++P+  YT+ L A      + H P    E    P++ + N   SYG F+ L+ ++F++ 
Sbjct: 244 YRNPQHPYTKKLIAAAPGKGQLHEPSTDGE----PILKVRNARKSYGGFEALKGISFDLK 299

Query: 297 RGATVAVVGESGSGKSTAARVVTGLLPPRIGSITLNGE---VLPPSFSRRSREQLRKIQM 353
            G TVAVVGESGSGKST AR++  L  P  G+    G+    L PS   + R   R +QM
Sbjct: 300 AGETVAVVGESGSGKSTLARILLRLDDPDSGTAHWKGQDLFTLSPSELFKLR---RDLQM 356

Query: 354 IYQMADTALNPRQSIRQILCRPLQFYVGLKGAALER-RLGELMEQIELSPRQFLHRVPGE 412
           ++Q    +LNPR ++ Q++      +  +   A  R R  EL+E++ LSP + + R P +
Sbjct: 357 VFQDPTQSLNPRMTVYQLISEAWVIHPEILPKAKWRARAAELLERVGLSP-EHMGRYPHQ 415

Query: 413 LSGGQKQRIGIARALAANPEIIICDEVTSALDQLVAEGILRLLSRLQDETGISYMFITHD 472
            SGGQ+QRI IARALA  P++I+CDE  SALD  V   ++RLL +L+ E GI+++FI HD
Sbjct: 416 FSGGQRQRIAIARALALEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGIAFIFIAHD 475

Query: 473 IDTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHYTRQLLASVPQMDPD 522
           +  VR  AD V+VM+ G V + G+ A+V D P+  YT+ L+++    DPD
Sbjct: 476 LPLVRDFADYVMVMQKGEVVEFGTVAQVFDNPQQRYTQALISATLDPDPD 525



 Score =  115 bits (288), Expect = 4e-30
 Identities = 89/281 (31%), Positives = 130/281 (46%), Gaps = 22/281 (7%)

Query: 2   LLKIDNLKVEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGLR 61
           +LK+ N +    G E     L GI+ +++ GE V ++GESG+GKSTL    L        
Sbjct: 275 ILKVRNARKSYGGFEA----LKGISFDLKAGETVAVVGESGSGKSTLARILLRLDDPD-- 328

Query: 62  FAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGTA 121
              G    +  DL  L+  E    R R +  V Q    S NP   +     E   IH   
Sbjct: 329 --SGTAHWKGQDLFTLSPSELFKLR-RDLQMVFQDPTQSLNPRMTVYQLISEAWVIHP-- 383

Query: 122 SRPDCEILARQLYASMQLPDAANFGL------RFPHQVSGGQLQRAMVAMAMACKPDLIV 175
                EIL +  + +         GL      R+PHQ SGGQ QR  +A A+A +P LIV
Sbjct: 384 -----EILPKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIV 438

Query: 176 FDEPTTALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEA 235
            DE  +ALDV+ Q  V+  +         A I+I HDL +V   AD + VM+ G  VE  
Sbjct: 439 CDEAVSALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFG 498

Query: 236 PTRQIMQSPREDYTRSLWAVREFHRPERRLERNDAPVISIN 276
              Q+  +P++ YT++L +      P+ +    +A + SI+
Sbjct: 499 TVAQVFDNPQQRYTQALISATLDPDPDVQAANRNARLASIS 539