Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  292 bits (748), Expect = 2e-83
 Identities = 176/529 (33%), Positives = 273/529 (51%), Gaps = 17/529 (3%)

Query: 2   LLKIDNLKVEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGLR 61
           LL +  L +E  G      ++  ++ ++  GE+ G++GESG+GK+    A +      + 
Sbjct: 6   LLTVRGLSLEVAGSG--HRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAIA 63

Query: 62  FAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGTA 121
             GG V+ +  D++ L  RE    RG  +  V Q    S NP+  +  Q  EG  +H   
Sbjct: 64  VTGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKL 123

Query: 122 SRPDCEILARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPTT 181
           S  +      ++   + + D       +PH+ SGG  QR M+A  M  KP L++ DEPTT
Sbjct: 124 SPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLIADEPTT 183

Query: 182 ALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQIM 241
           ALD   Q  V+  +        TA + I+HDL +VA+   RI VM  G  VE+  T  ++
Sbjct: 184 ALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQGRTEDLL 243

Query: 242 QSPREDYTRSLWAVREFHRPERRLERNDAPVISINNVTASY-GHFDVLRD---------V 291
            +PR  YT+ L +   F    R ++ + AP++S   +   Y G   +L+          V
Sbjct: 244 DAPRHPYTKKLLSSLPFRGEPRSIDTSKAPMVSARGIVVDYAGRKSLLKKAKPKRALHGV 303

Query: 292 AFEIPRGATVAVVGESGSGKSTAARVVTGLLPPRIGSITLNGEVLPPSFSRRSREQLRKI 351
           + +I  G  VA+VG SGSGK+T  R + GL+    G I   G      ++    +     
Sbjct: 304 SIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRERNEDWN----DYRLNC 359

Query: 352 QMIYQMADTALNPRQSIRQILCRPLQFYVGLKGAALERRLGELMEQIELSPRQFLHRVPG 411
           QM++Q   ++L+PR +I+ ++   L+   GL  AA  +R  E +E++ L    +  R P 
Sbjct: 360 QMVFQDPYSSLDPRMTIQALVEEALRLVPGLDQAAKRKRALETLEEVGLGV-DYAGRYPH 418

Query: 412 ELSGGQKQRIGIARALAANPEIIICDEVTSALDQLVAEGILRLLSRLQDETGISYMFITH 471
           ELSGGQ+QR+ IARA+A  P  +I DE  SALD  V   +L L S LQ   G S +FI+H
Sbjct: 419 ELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISH 478

Query: 472 DIDTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHYTRQLLASVPQMD 520
           D+  V  +AD VVVM+ G + ++G +  + D PR  YTR+LL+++P +D
Sbjct: 479 DLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRRLLSAIPALD 527