Pairwise Alignments

Query, 323 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  194 bits (493), Expect = 2e-54
 Identities = 103/309 (33%), Positives = 171/309 (55%)

Query: 11  RMVAVRLGLGLFTLLFISLLIFLAVGLLPGDIAQQVLGQSATPETVAAFRRELGLDQPLS 70
           R +  +L + + TLL IS+++F  + L+PGD A  +LG  A P+++A  R  LGLD  L 
Sbjct: 3   RFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHSLV 62

Query: 71  WRYLTWIGGILTGDFGHSLANGRPVAELLSARLGNTLFLAAYAAAIAIPLAVLLGLLAAM 130
            ++L W   +L+ D G S++  + V  L+  R   +  +   A   A  +AV +GL+AA 
Sbjct: 63  TQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIAAW 122

Query: 131 WRGTWFDRVINVMTLSAISFPEFFVAYILMFWLSVHMGWFPSVADPGAAPDLFDMLRRAF 190
            + +  D  +  +    +S P F++  +L+    + +GW P V     +   +  +    
Sbjct: 123 KQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSYMV 182

Query: 191 LPAITLVLVVTAHMMRMTRAAVLNVLAEPYVIMARLKGASRWRIITRHALPNALAPISNV 250
           LP +TL LV    + RM RA+ + VL   Y+  AR KG S   ++ +HALPNA AP   +
Sbjct: 183 LPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTWTL 242

Query: 251 IAINVAWLITGVVIVEVVFVYPGLGQLMVDSVTNRDMPVVQACALIFAAVYILLNLLADV 310
           + + +  L+ G+ ++E VF  PG+G+LMVD++  RD PV+Q C L+   +Y+L+NL  D+
Sbjct: 243 VGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCVDL 302

Query: 311 LAIATNPRL 319
           L    +PR+
Sbjct: 303 LYPLFDPRV 311