Pairwise Alignments

Query, 323 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  181 bits (460), Expect = 2e-50
 Identities = 116/332 (34%), Positives = 173/332 (52%), Gaps = 21/332 (6%)

Query: 13  VAVRLGLGLFTLLFISLLIFLAVGLLPGDIAQQVLGQSAT-PETVAAFRRELGLDQPLSW 71
           +A RLGL + T   I+LL F  + L+PGD  + ++G+    PE  A     LGL++PL  
Sbjct: 5   IARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLPV 64

Query: 72  RYLTWIGGILTGDFGHSLANGRPVAELLSARLGNTLFLAAYAAAIAIPLAVLLGLLAAMW 131
           +YL ++G +  GD G SL     V          TL LA  A   A  + +L G++AA+ 
Sbjct: 65  QYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVIAALK 124

Query: 132 RGTWFDRVINVMTLSAISFPEFFVAYILMFWLSVHMGWFPSVA--------DPGAAPDLF 183
           RG+ FD  +  ++L+  S P F+   IL+ + SV +GW P           +P     L 
Sbjct: 125 RGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTGFMLI 184

Query: 184 DML------------RRAFLPAITLVLVVTAHMMRMTRAAVLNVLAEPYVIMARLKGASR 231
           D L                LPAI L  +  A + RMTR+++L VL E Y+  AR KG S 
Sbjct: 185 DTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAKGLSP 244

Query: 232 WRIITRHALPNALAPISNVIAINVAWLITGVVIVEVVFVYPGLGQLMVDSVTNRDMPVVQ 291
            R++  H L NAL P+  V  + V  L+ G V+ E +F +PG+G+ +++++  RD PVVQ
Sbjct: 245 ARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVVQ 304

Query: 292 ACALIFAAVYILLNLLADVLAIATNPRLLHPR 323
              L+ A + IL+N + D+L    NPR+ H R
Sbjct: 305 NGILLIACLVILVNFVVDILYGLANPRIRHQR 336