Pairwise Alignments

Query, 323 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 316 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  296 bits (757), Expect = 6e-85
 Identities = 148/311 (47%), Positives = 211/311 (67%)

Query: 9   IQRMVAVRLGLGLFTLLFISLLIFLAVGLLPGDIAQQVLGQSATPETVAAFRRELGLDQP 68
           I  ++A RL + L TLL +S ++F A  LLPGD A  +LGQSATPE VA  R  + LD P
Sbjct: 5   ILSLIARRLVVMLTTLLIVSFIVFSATSLLPGDTATILLGQSATPEAVAGLRTAMHLDDP 64

Query: 69  LSWRYLTWIGGILTGDFGHSLANGRPVAELLSARLGNTLFLAAYAAAIAIPLAVLLGLLA 128
              R++ W+ G+L G+ G S AN   +A+L+  R  N++ LA     IA+PLA+ LG+ +
Sbjct: 65  ALLRFVRWLFGLLHGELGTSYANNMAIADLIGPRFINSMKLAGITTVIAVPLALTLGISS 124

Query: 129 AMWRGTWFDRVINVMTLSAISFPEFFVAYILMFWLSVHMGWFPSVADPGAAPDLFDMLRR 188
           AM RGT +DR + V+T+  IS PEF +A + +   +V++ W P+++       +FD+LR 
Sbjct: 125 AMLRGTLYDRAVTVLTIGVISVPEFMIATLAVLLFAVYLKWLPALSLVSEIHSVFDVLRI 184

Query: 189 AFLPAITLVLVVTAHMMRMTRAAVLNVLAEPYVIMARLKGASRWRIITRHALPNALAPIS 248
             +P ITL  VV+A M+RM+RAAV+  L  PYV MA LKGA R RI+ RHALPNAL PI 
Sbjct: 185 YAMPVITLTFVVSAQMIRMSRAAVIETLDTPYVEMALLKGAPRMRIVLRHALPNALGPIV 244

Query: 249 NVIAINVAWLITGVVIVEVVFVYPGLGQLMVDSVTNRDMPVVQACALIFAAVYILLNLLA 308
           N +A+++++L+ GV+IVE +F YPG+ +LMVD V  RD+P++Q+CA+IF   Y+LL   A
Sbjct: 245 NAVALSLSYLVGGVIIVETIFNYPGIAKLMVDGVATRDLPLIQSCAMIFCVGYLLLITTA 304

Query: 309 DVLAIATNPRL 319
           D++AI +NPRL
Sbjct: 305 DIIAIMSNPRL 315