Pairwise Alignments

Query, 484 a.a., bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase from Agrobacterium fabrum C58

Subject, 321 a.a., L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) from Pseudomonas putida KT2440

 Score =  300 bits (767), Expect = 6e-86
 Identities = 156/302 (51%), Positives = 200/302 (66%), Gaps = 5/302 (1%)

Query: 4   AAIGGGVIGGGWIARFILAGHDVTVFDPHPEANRIVTEVMANAAEAWGRLYQSPLPKPGS 63
           AA+G GVIG GW+AR +  G DV  +DP P A + + + +ANA  A  +   +P      
Sbjct: 11  AALGSGVIGSGWVARALAHGLDVVAWDPAPGAEQALRKRVANAWPALEKQGLAPGASQDR 70

Query: 64  INWASSIAEAVAGADYIQESVPERLDLKHRIIAEIEATASPQAIIASSTSGFKPSELREG 123
           + + ++I E V  AD+IQES PERLDLK  + A+I A A P AII SSTSG  PSE  E 
Sbjct: 71  LKFVATIEECVRNADFIQESAPERLDLKLDLHAKISAAAKPDAIIGSSTSGLLPSEFYES 130

Query: 124 SVHSERVIVAHPFNPVYLLPVVEVVGGG----VAAQRASDILVSVGMKPVQIGREIDAHI 179
           S H ER +V HPFNPVYLLP+VE+VGG      A + A  I  ++GM+P+ + +E+   I
Sbjct: 131 STHPERCVVGHPFNPVYLLPLVEIVGGSRTSPEAIEAAKTIYTALGMRPLHVRKEVPGFI 190

Query: 180 GDRLLEAIWREALWLVKDGIATTQEIDDIIRYGFGLRWAQMGLFETYRIAGGEAGMRHFL 239
            DRLLEA+WREAL LV DG+ATT EIDD IR+G GLRW+ MG F TY +AGG+AGMRHF+
Sbjct: 191 ADRLLEALWREALHLVNDGVATTGEIDDAIRFGAGLRWSFMGTFLTYTLAGGDAGMRHFM 250

Query: 240 AQFGPALKWPWTKLMDVPEFNDELIDLIAGQSDAQSGAYSIRELERIRDSNLIGIFHALK 299
           +QFGPALK PWT L   PE  D+LID +   +  Q G  SI  LER RD  L+ +  A+K
Sbjct: 251 SQFGPALKLPWTYL-PAPELTDKLIDDVVSGTSEQQGERSIAALERYRDDTLLAVLEAVK 309

Query: 300 AN 301
           ++
Sbjct: 310 SS 311