Pairwise Alignments

Query, 322 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 9e-28
 Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 15/309 (4%)

Query: 4   KSPFHLTFLLFESFSNMVLASAIEPLRAARDLSGRQLFSWQLCSLDGNAIISSSRAAIAA 63
           ++P+ + F+L E FS      A++ L  A +L     F +   SLDG+ ++S     + A
Sbjct: 27  QAPYRVDFILLEHFSMASFTVAMDVLVTA-NLLRADSFQFTPLSLDGDRVLSDLGLELVA 85

Query: 64  DLPLSRVGATDALILVAGYGIRNHLNQESAAAVRRK--ARGLPIVGGLDTGAWLLARIGL 121
              LS     +  +LV   G+R  L       +     A G+ + GGL  GAW L R G+
Sbjct: 86  T-ELSAAALKELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMAL-GGLWNGAWFLGRAGV 143

Query: 122 LAGRRATIHWMEKKEFAENFPEVRVTDAPYVVDGNIVTCGDAQSVLTWSLDLIGKHADEA 181
           L     +IH  ++   +E  P+ R+T A + +D + ++       +   L L+ +   + 
Sbjct: 144 LDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDG 203

Query: 182 LRFDVANM--FGGVQKSAERTLARGLSGRMSDHGLPAALQRAIVVMRETAEQPLKLPDIA 239
           L   V  +  F G +    R +  G    MS H     L+  + +M    E+ L L  +A
Sbjct: 204 LAEGVEEILSFSGARY---RQVGPGAKKSMSLH-----LRTIVELMENNLEETLSLDQLA 255

Query: 240 DRVAVSERSLDRLFHRYLGMSAGQYYSQIRLSHARALALETNLTLYEIAFRTGFSSPSTL 299
                S R +DRLF   LG S  +YY ++R++ +R L   ++L++ E+A   GF S S  
Sbjct: 256 AYSGRSRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHF 315

Query: 300 ARAYRLKFG 308
           ++ Y   FG
Sbjct: 316 SKCYAAYFG 324