Pairwise Alignments

Query, 303 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 289 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  253 bits (646), Expect = 4e-72
 Identities = 127/279 (45%), Positives = 182/279 (65%)

Query: 8   FSLLAVLIWVGNTIVSKLAAGAIAPGTIAFERWFIAFVILTPLVYRDAWRHRRTIAAHLP 67
           + LLA+ IW GNT+V+KLA GA+ P  I F RW +A ++ TP + +    +   I  +L 
Sbjct: 5   YPLLAIFIWAGNTVVNKLAVGALFPAEIGFYRWLLAALLFTPFMIKPVIANWALIRPNLG 64

Query: 68  KLILLGLLGMAACQGLGYYAAGLTTATNMAIMLSLVPLLTLILSAVFLAERPSSLAVIGG 127
           K+ +LG+LGMA  Q L YYAA LTTATNM I+LSL+PL+ L  + + L +R +  A+ G 
Sbjct: 65  KVFILGVLGMAVYQSLAYYAASLTTATNMGIILSLMPLMALTAAIISLGQRLTYGALTGA 124

Query: 128 IISLSGIFIVLGQGDPSRLLSQGVGRGDAMMLAAVLAYAGYGILLRRWAIPLATWTSIYV 187
           ++S +G+ +V+  G    LL  GV  GD MML A LAYA Y  LL++W + L     +Y+
Sbjct: 125 VLSFAGVVVVVSAGSLDALLQHGVNLGDGMMLVATLAYAVYSTLLKKWQLRLPPLVLLYL 184

Query: 188 QIGAAVVLLVPSYLLSAPSALTLPNTAMVLYAAIPGSILAPFVWMTAVKHLGAARTAIFM 247
           Q+  AVV+L P +L SA + L   N  +VLYA +  S+LAP  WM +VK LG +RT +F 
Sbjct: 185 QVLVAVVVLFPLFLFSAKAGLGWANIPLVLYACLLASMLAPLAWMHSVKTLGPSRTTLFF 244

Query: 248 NLIPIFTAIVAAIFLGEALYIYHLLGGGMTVAGIILVQR 286
           NL+P+ TA++AA+ L E L +YHL+GG +T+ G+IL +R
Sbjct: 245 NLLPLITALIAAVVLKEELALYHLVGGLLTLGGVILSER 283