Pairwise Alignments

Query, 311 a.a., transmembrane sensor from Agrobacterium fabrum C58

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 7e-30
 Identities = 100/312 (32%), Positives = 149/312 (47%), Gaps = 33/312 (10%)

Query: 12  EATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLWKNLGSALGETRK--TSA 69
           EA  W+V++ SGTAT  D  A+  W  RS  H QA       W+   + LG+ R+  T  
Sbjct: 13  EAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQA-------WQRAEAILGDFRRLPTPV 65

Query: 70  STVTRRSFIAAGSVAAGAA----GVGVVLSELGFLPSVDA----MLADYATGVGEQRTVE 121
           +  T R     G+V+   A    G+ ++ +   +L   +       AD  T VGEQRT+ 
Sbjct: 66  TGETLRRLSRNGAVSRRQALHRLGLWLLAAPAAWLAWRETPWQQWTADAHTAVGEQRTLT 125

Query: 122 LVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHD---AARPFVVTAANGDTTAT 178
           L DGS  +L+  T + + +    R + L +G  +     D    ARP  V   +G  TA 
Sbjct: 126 LADGSQVLLNTDTAIDITFDARQRRIDLLAGEILLTSAKDPATPARPLSVRTPHGQATAR 185

Query: 179 GTSFSVKHGEEDVSIECLEGHITVQCL-GDS-QLNGGEGISYSRAGLGKKV--AADIETA 234
           GT FSV+       +  LEG +  + L  DS  L  GE  ++     G +V  A+ +ET 
Sbjct: 186 GTRFSVRIHGPLTQVAVLEGAVDTRPLHADSLLLKAGERSAFD----GDRVLPASPLETG 241

Query: 235 -AAWRRGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEILAHLE 293
             AW  G+L+  D  LAD++ +L R+R G V+     +R  ++SG F L   D  L  L 
Sbjct: 242 DLAWEHGMLLARDMRLADLLQELARYRPG-VLRCHPAVRELKVSGAFPLADTDASLRLLS 300

Query: 294 ETLQVRPVSLVG 305
           +TL   PV++ G
Sbjct: 301 DTL---PVNIQG 309