Pairwise Alignments

Query, 311 a.a., transmembrane sensor from Agrobacterium fabrum C58

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 82/304 (26%), Positives = 124/304 (40%), Gaps = 13/304 (4%)

Query: 8   ALRREATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLWKNLGSALGETRKT 67
           A+ + A  W  R+ +             W +    H  A+     + +  G   G+  + 
Sbjct: 9   AVLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRFGGLSGQAEQA 68

Query: 68  SA-------STVTRRSFIAAGSVAAGAAGVGVVLSELGFLPSVDAMLADYATGVGEQRTV 120
                       +RR+ + +  VA  A  +G    + G++ S  A  A Y TG+GE R V
Sbjct: 69  RQVFDSVRRDRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVDSPRAWFATYRTGLGEVRPV 128

Query: 121 ELVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHDAARPFVVTAANGDTTATGT 180
            L DGS   L+GGT L + +   SR L L  G  + +   D  RP  V    G     GT
Sbjct: 129 TLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKD-PRPLSVVTRAGRVQPLGT 187

Query: 181 SFSVKHGEEDVSIECLEGHITVQCLGDSQ---LNGGEGISYSRAGLGKKVAADIETAAAW 237
            FSV+      ++    G +   C G  +   L  G+ + +    +G    A       W
Sbjct: 188 RFSVRDQGLQTTLSVFAGAVQATCSGSGRQTTLQAGQMMVFDAQQVGAPSTAQ-RLREDW 246

Query: 238 RRGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEILAHLEETLQ 297
            RG+L+ ED PL  ++  L  +R G + I  + + S R  G F L   D  LA LE  L 
Sbjct: 247 SRGVLVAEDMPLVQMIDILRDYRHGHLGIDPA-IGSLRAVGTFPLLDTDRALAMLERALP 305

Query: 298 VRPV 301
           +R V
Sbjct: 306 IRVV 309