Pairwise Alignments

Query, 311 a.a., transmembrane sensor from Agrobacterium fabrum C58

Subject, 318 a.a., putative transmembrane sensor from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 82/301 (27%), Positives = 140/301 (46%), Gaps = 21/301 (6%)

Query: 11  REATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLWKNL------GSALG-E 63
           R+A  W++R+          +   +WRS    +EQA+Q+   L K+L      G+ L  +
Sbjct: 12  RQAIQWMLRLRESGHDPALQQQCAQWRSSHHENEQAWQRMVHLHKDLDLRAIPGAGLALQ 71

Query: 64  TRKTSASTVTRRSFIA--AGSVAAGAAGVGVVLSELGFLPSVDAMLADYATGVGEQRTVE 121
           T +TS   + RR  +    G V AG+A     L++   L +V A  +DYATG GE+R   
Sbjct: 72  TLETSQQRLRRRQALKLLGGVVMAGSASW---LAK--DLDTVSAWTSDYATGTGERRVFT 126

Query: 122 LVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHDAARPFVVTAANGDTTATGTS 181
           L DGS   L+  + + L +    R + L  G  + +   +   P +V   +         
Sbjct: 127 LPDGSLMQLNTCSAVDLAFHDQQRLVRLKLGELMINC--NPRHPLLVETRDALLEGFEGR 184

Query: 182 FSVKHGEEDVSIECLEGHITVQCLGDSQL---NGGEGISYSRAGLGKKVAADIETAAAWR 238
           F      +   +    G + +   G  QL    GG+       G  +    D++ A AW 
Sbjct: 185 FVAYQDSDCTRVSVSHGKVAIHRPGAGQLQWIEGGQNWRLDAQGAHRLAHMDMD-AMAWT 243

Query: 239 RGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEILAHLEETLQV 298
            GL++ +D  L++ ++ ++R+R G  +  S+++   R+SGVF L  P+++L  L +TL V
Sbjct: 244 EGLIVTQDMRLSNFLAQVSRYRHG-YLGCSNEIADLRLSGVFRLEDPEQLLRLLPQTLPV 302

Query: 299 R 299
           R
Sbjct: 303 R 303