Pairwise Alignments

Query, 169 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 1e-12
 Identities = 36/132 (27%), Positives = 72/132 (54%), Gaps = 5/132 (3%)

Query: 33  SDDLAQEAWIKLARN-GAAALAAPVPYLMRIARSLAVDHDRGQK--RKLTSNDI--DVLM 87
           ++DL QE +++++R  G   +    P++ + AR+LA+DH R ++   ++  +D+  +VL 
Sbjct: 31  AEDLLQETYLRVSRALGERPIEHIEPFVFQTARNLALDHLRARRVQARMLVDDVPDEVLH 90

Query: 88  SVADEQPGPEKQFEDRDQVRCLIEIIDELPERQRKMLVACRLDQRRHADIAAEFGVSIRT 147
           SVA      E        ++ L   +++L ERQ+++ +  RL    + +IA +  VS  T
Sbjct: 91  SVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQRIFILSRLHGATYLEIAEQLSVSPST 150

Query: 148 VELEVRKAVDYC 159
           V+ E++  +  C
Sbjct: 151 VQKELKLIMAIC 162