Pairwise Alignments

Query, 120 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 193 a.a., RNA polymerase sigma E factor from Pseudomonas putida KT2440

 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 2   LRGLRALHGFTPGTALKSWLFTILRNTFCTRYKVSK-------------RECVGLPVGIE 48
           ++  RAL  F   +A  +WL+ I  NT    Y VS+              E      G++
Sbjct: 56  IKAYRALGNFRGDSAFYTWLYRIAINT-AKNYLVSRGRRPPDSDVSSEDAEFYDGDHGLK 114

Query: 49  QTMSTPASREWHVQHQEAMRAIRDLDKDQKKALLLVA-GGTSYSDAAAICGCRVGTIKSR 107
              S   S           R I+ L +D + AL L    G SY D A++  C VGT++SR
Sbjct: 115 DLESPERSLLRDEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSR 174

Query: 108 VNRARESLRRNL 119
           + RARE++ + L
Sbjct: 175 IFRAREAIDKAL 186