Pairwise Alignments

Query, 362 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 290 a.a., sugar ABC transporter permease from Dickeya dadantii 3937

 Score =  119 bits (299), Expect = 8e-32
 Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 6/226 (2%)

Query: 129 LARDVVFLTALVNTLSFVVVVAPVQAALALFLALLVNQKIPGVTIFRAIYFMPVVLSVVV 188
           L  D VF  AL+N L ++++       LAL LA+ + +        R  +F P+++ +V 
Sbjct: 55  LLNDAVFWRALLNNLVYILLTVIPGVVLALLLAVALWENHAVNRWLRTAFFFPMIIPMVS 114

Query: 189 VALLWRFIYAADNGLLNSLLSYMSFGLFQPID--WLGRTDTALWAILVMSVWQGVGFHMV 246
            A LW FI+    GLL+  L+     LF P++  +LGR+++AL A+ ++ VW+  G++M+
Sbjct: 115 AAALWLFIFMPGIGLLDYYLAK----LFGPMNNNYLGRSNSALLALALIGVWKFAGYYML 170

Query: 247 IWLSGLQTISPDLYEAADIEGASRWQRFSMITWPLLRNTAVLIVIVITMQAFALFAQIDV 306
            +L+GLQ+I P   EAA +EGAS  Q F  +T PLLR T   ++    + +      + V
Sbjct: 171 FFLAGLQSIPPSTREAAIMEGASSTQVFFRVTLPLLRPTLSFVITTALIYSITQIDHVAV 230

Query: 307 MTKGGPRDSTQSIVYQAVERGYRQQDIAAGSAISVVLFLLVLCISL 352
           MT GGP ++T  ++Y      +   D+   SA + +    +   SL
Sbjct: 231 MTHGGPDNATTVLLYYIQNLAWDTHDLGKASAATFLTLAGLFVFSL 276



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 18 WLMAAPAMVLIGLFLITPFLLGLGFSFTNQRLTSPNPTEFVGVENYTRLLGIGV 71
          W++ +P+++ + LF   P L  +  S  + R+       FVG+ N  RLL   V
Sbjct: 8  WVILSPSLLFLLLFTYFPLLRSVYDSLFDTRMAGAG-ASFVGLGNVARLLNDAV 60