Pairwise Alignments

Query, 293 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 300 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

 Score =  107 bits (266), Expect = 4e-28
 Identities = 66/282 (23%), Positives = 136/282 (48%), Gaps = 19/282 (6%)

Query: 17  YVLMLAFAAIFILPLLFMGFSSLKPNDQLLSDATSIRAFLPV-GYLSLENYTAAFVRAPI 75
           Y+++LA   + + PL +M  +S KPN ++ +  +         G++   N          
Sbjct: 33  YIILLAVGILMLYPLAWMFSASFKPNHEIFTTLSLWPTHATWDGFI---NGWKTGTEYNF 89

Query: 76  ATFIFNSVLVTVVTVFLALLFGSLAAFAFTFLNWRGKDVLFSIILATLIIPFETIAVPLL 135
             ++ N+    +  V L ++  ++ A+ F       K+  F+ ++AT+++P   + +P  
Sbjct: 90  GHYMINTFKYVIPKVALTVISSTIVAYGFARFEIPWKNFWFATLIATMLLPSTVLLIPQY 149

Query: 136 LEVNNLPWIGSGGFTWGWLNSWHVQIIP--WIADGLTIFLFVQYFKDLPKELLEAARIDG 193
           +    +          G LNS+    +P  +   G  +F+ +Q+ + +P+++ EAA+IDG
Sbjct: 150 IMFREM----------GMLNSYLPLYVPVAFATQGFFVFMLIQFLRGVPRDMEEAAQIDG 199

Query: 194 ASWLRIYTQVVMPLSGPVIATAAILKFLVMYSQQYLWPLLVTQSEAYRPVMVGLQYFFQL 253
            +  ++   VV+P+  P I + A+ +F+      ++ PL+   S    P+ + L+    +
Sbjct: 200 CNSWQVLWYVVVPILKPAIISVALFQFM-WSMNDFIGPLIYVYSVDKYPIALALKMSIDV 258

Query: 254 --NTPWGEVMAYLTIITLPVLIFYLCLQRLFISSIAASGIKG 293
               PW E++A  +I  LP +I +   QR F+  + +SGIKG
Sbjct: 259 TEGAPWNEILAMASISILPSIIIFFMAQRYFVQGVTSSGIKG 300