Pairwise Alignments

Query, 293 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 259 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  137 bits (346), Expect = 2e-37
 Identities = 84/243 (34%), Positives = 131/243 (53%), Gaps = 14/243 (5%)

Query: 53  RAFLPVGYLSL--ENYTAAFVRAPIATFIFNSVLVTVVTVFLALLFGSLAAFAFTFLNWR 110
           R   PV  L++  EN+T    +    TF+ NSV VT V   L L+  ++AAFA +   +R
Sbjct: 28  REITPVQKLTIATENFTDPLTQFSFLTFLKNSVFVTFVATVLTLIVNAMAAFALSKYRFR 87

Query: 111 GKDVLFSIILATLIIPFETIAVPLLLEVNNLPWIGSGGFTWGWLNSWHVQIIPWIADGLT 170
           G+  +F +I++TL+IP   + VP  L +  +  +          N W V IIP +A    
Sbjct: 88  GEKAIFVLIISTLMIPLTVVMVPAYLVIVGVGLVD---------NLWGV-IIPTVATPTG 137

Query: 171 IFLFVQYFKDLPKELLEAARIDGASWLRIYTQVVMPLSGPVIATAAILKFLVMYSQQYLW 230
           +FL  QY   +P EL+EAAR+D AS  RI+ ++++PL+ P +A  AI   L  ++  +LW
Sbjct: 138 VFLLRQYMLTIPDELIEAARVDAASEFRIFWRIILPLTAPALAVLAIFSVLWRWN-DFLW 196

Query: 231 PLLVTQSEAYRPVMVGLQYF-FQLNTPWGEVMAYLTIITLPVLIFYLCLQRLFISSIAAS 289
           PL+V  S     + VGL  F  + +  W  ++A   +   PV + +L LQR   + IA +
Sbjct: 197 PLIVLSSRENFTLQVGLNAFQGEFSVQWHYILAMTFLSLAPVTVVFLFLQRYITTGIAGT 256

Query: 290 GIK 292
           G+K
Sbjct: 257 GMK 259