Pairwise Alignments

Query, 359 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 506 a.a., Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 39/272 (14%)

Query: 77  STRKSILSMLFGKAVAEGKIDLDLTMADLNIDE-DHGLLPIEKTATLRNLLISSSGVYHQ 135
           S  KS+     G A+A+GK  LD  +     +     + P     T+R+LL   +G  H+
Sbjct: 92  SLTKSVTVCAVGMAIADGKFGLDDKVVSFFPEHLPPTVSPNLAAMTVRDLLTMRTG--HE 149

Query: 136 PGSPGSNTKNIPERGSKK---------PGDYFHYNNWDFNVLGAAFEQLTGRSVFEAFEE 186
               GS  + I      +         PG  F Y +    +L A   + TG+SV +  + 
Sbjct: 150 SMVSGSVWRPIRTSWIAEFFKIPVVYTPGSKFVYTSAATYMLSAIVTRTTGQSVADYLKP 209

Query: 187 DFAGPMGLQDFDPSRQRMMGYDGASRYLAYHFFLSGRDMARLGLSMVRNGRWGDEQIIPA 246
            F  P+ +  ++      +G +G S   A        D  +LG+   ++G W  ++I+  
Sbjct: 210 RFFEPLDITGYEWD----VGPEGISPG-ANGLSWKTVDSLKLGILHAQDGMWNGKRILTK 264

Query: 247 DWVAESTRIRVPAGKMNESEKSRIAGYSYLWWIPVVTKDTPEWDGAFVAAGHFGQFILGM 306
           +WV     +  P  K           Y Y WW+           GA+ A G FGQ+ +  
Sbjct: 265 EWV---DAVHAPHTKDK---------YGYQWWLGP--------HGAYNADGLFGQYSVVF 304

Query: 307 PALDMVLVNRRAIPDDLAIARNDGSFKEELPA 338
           P  + VL    A+P       N G   +  PA
Sbjct: 305 PEQNAVLALNSALPPKAGF--NAGLLYKHFPA 334