Pairwise Alignments

Query, 295 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  204 bits (519), Expect = 2e-57
 Identities = 110/271 (40%), Positives = 172/271 (63%), Gaps = 10/271 (3%)

Query: 21  LAVMGLALIFLIVLMAVFAPYLSPQNPYDLMQLDIMDGRMAPGTESSTGFTFLFGSDDQG 80
           L+ +G+ L+ +IVL+A+FAP ++P   YD +Q +I      P  E      F  G+D  G
Sbjct: 24  LSWIGIGLLVMIVLVALFAPLIAP---YDPLQQNIAYRLEPPSAE------FWLGTDTYG 74

Query: 81  RDMLSAILYGLRISLIVGLGSAALAFIIGTAFGLTAAYVGGRVETAMMRLVDLQLSFPTI 140
           RD+LS ++YG R+SL+VG  +  +A ++G+A G+ A YVGG  +  +   VD+ LSFPT+
Sbjct: 75  RDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTL 134

Query: 141 LSALLILALLGKSVGNVVFAIVLVEWATYARTARGAALTELRREYVEAARSLRLPHRNIL 200
           L  L++ A+LG S+ N++ AI + E A + R AR   +   +R++VEA RSL      ++
Sbjct: 135 LLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLM 194

Query: 201 FRQLLPNCLSPLVVLLTMQVARAITLEATLSFLGLGVPVTEPSLGLLISSGYEFILSGTY 260
              +LPN +S ++VL  + +A AI  EA+LSF+GLGVP   P+ G +I  G+E IL   +
Sbjct: 195 TVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILD-AW 253

Query: 261 WIALFPGIALLVTIFAINLVGDRLRQLVDPK 291
           W+ +FP +A+L+T+ A++L+GD LR   DPK
Sbjct: 254 WLTVFPSLAILLTVLALSLLGDALRDANDPK 284