Pairwise Alignments

Query, 295 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  199 bits (505), Expect = 9e-56
 Identities = 108/281 (38%), Positives = 171/281 (60%), Gaps = 6/281 (2%)

Query: 12  FMRQFARSPLAVMGLALIFLIVLMAVFAPYLSPQNPYDLMQLDIMDGRMAPGTESSTG-F 70
           F + FAR+  AVMGLA + L+V  A+FAP+++P +P +  +    D  + P      G +
Sbjct: 28  FWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYR----DFLLTPPVWLEGGTW 83

Query: 71  TFLFGSDDQGRDMLSAILYGLRISLIVGLGSAALAFIIGTAFGLTAAYVGGRVETAMMRL 130
            F+ G+D+ GRD+LS ++ G R+SL++GL S  ++ I G   GL A +    +  ++MRL
Sbjct: 84  QFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRL 143

Query: 131 VDLQLSFPTILSALLILALLGKSVGNVVFAIVLVEWATYARTARGAALTELRREYVEAAR 190
           +D+ L+ P++L A+ I+A+LG  + N V AI +V   +Y R  R A + EL R+YV AAR
Sbjct: 144 MDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAAR 203

Query: 191 SLRLPHRNILFRQLLPNCLSPLVVLLTMQVARAITLEATLSFLGLGVPVTEPSLGLLISS 250
                   ++F  +LPNC++PL+V  T+  + AI   A L FLGLGV    P  G +++S
Sbjct: 204 LAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLAS 263

Query: 251 GYEFILSGTYWIALFPGIALLVTIFAINLVGDRLRQLVDPK 291
             ++I    +W+   PG+ +L+++ AINL+GD LR  +DPK
Sbjct: 264 ARDYI-ERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPK 303