Pairwise Alignments

Query, 295 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  174 bits (442), Expect = 2e-48
 Identities = 95/274 (34%), Positives = 158/274 (57%), Gaps = 10/274 (3%)

Query: 19  SPLAVMGLALIFLIVLMAVFAPYLSPQNPYDLMQLDIMDGRMAPGTESSTGFTFLFGSDD 78
           SPL V G  +I L++LM +F+P+L+  +P  +     +  R+ P + +       FG+D+
Sbjct: 30  SPLTVTGAVIIVLMLLMMIFSPWLATHDPNAID----LTARLLPPSAAHW-----FGTDE 80

Query: 79  QGRDMLSAILYGLRISLIVGLGSAALAFIIGTAFGLTAAYVGGRVETAMMRLVDLQLSFP 138
            GRD+ S +L G + S++ GL   A+A +IG+  G  +  +GGR +  +MR++D+ LS P
Sbjct: 81  VGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIP 140

Query: 139 TILSALLILALLGKSVGNVVFAIVLVEWATYARTARGAALTELRREYVEAARSLRLPHRN 198
           +++  + + A LG S+ N + AI +V    Y R ARG AL   +  YV+AA++      +
Sbjct: 141 SLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWH 200

Query: 199 ILFRQLLPNCLSPLVVLLTMQVARAITLEATLSFLGLGVPVTEPSLGLLISSGYEFILSG 258
           ++   +L N L PL+V  ++ +  AI + ATL F+GLG        G ++++G  ++L  
Sbjct: 201 LINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLD- 259

Query: 259 TYWIALFPGIALLVTIFAINLVGDRLRQLVDPKA 292
            +W   FPG A+L+T    NL GD +R L+DPKA
Sbjct: 260 QWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKA 293