Pairwise Alignments

Query, 295 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 293 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  178 bits (451), Expect = 1e-49
 Identities = 100/284 (35%), Positives = 157/284 (55%), Gaps = 7/284 (2%)

Query: 6   LRTGLLFMRQFARSPLAVMGLALIFLIVLMAVFAPYLSPQNPYDLMQLDIMDGRMAPGTE 65
           L  G +   +F+R+P AV+G  ++  ++++AVFAP+L+P   +    +D     M P  E
Sbjct: 14  LSAGYMMWYRFSRNPAAVIGSLILLSVLVLAVFAPWLTPYPKHIGAVVDFRARHMPPDLE 73

Query: 66  SSTGFTFLFGSDDQGRDMLSAILYGLRISLIVGLGSAALAFIIGTAFGLTAAYVGGRVET 125
                   FG+D  GRD+ S  ++GLR+SL++ +G   ++  +GT  GL A Y GG  E 
Sbjct: 74  H------WFGTDKAGRDIFSRTIFGLRVSLLLVIGVLGISVPVGTVLGLVAGYFGGWTEK 127

Query: 126 AMMRLVDLQLSFPTILSALLILALLGKSVGNVVFAIVLVEWATYARTARGAALTELRREY 185
            +  L ++ L+ P ++ AL +  LL  ++ N + AI L+ W  +AR     + +    +Y
Sbjct: 128 LISGLTNVMLAMPPLVMALAVSNLLEPTLTNAMIAITLLWWTWHARLIYSVSKSIASEDY 187

Query: 186 VEAARSLRLPHRNILFRQLLPNCLSPLVVLLTMQVARAITLEATLSFLGLGVPVTEPSLG 245
           +EAAR       +ILFR++LPNC+S + V  T+  A  I   ATLSFLG GV    P LG
Sbjct: 188 IEAARLAGAGPLHILFREILPNCVSVISVKTTLDAAFVILFGATLSFLGFGVKPPTPDLG 247

Query: 246 LLISSGYEFILSGTYWIALFPGIALLVTIFAINLVGDRLRQLVD 289
            +++ G +F +   +W  L PG A+L      NL+GD LR + D
Sbjct: 248 SMVADGRQF-MPDFWWEVLCPGAAVLYVTLGFNLLGDGLRDMFD 290