Pairwise Alignments

Query, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  137 bits (346), Expect = 7e-37
 Identities = 128/513 (24%), Positives = 215/513 (41%), Gaps = 51/513 (9%)

Query: 7   LLLTSLIGLVAQPVMA--KNLTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTE-RTAE 63
           +  TSL+ +      A  ++L     G+    D   Y  + +N  A  +++RL E    E
Sbjct: 10  MFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDAAEPLYNRLVEFEKGE 69

Query: 64  GRLVEGLATKWDTVSE-TKWRFALRDGVKWHDGKPF------TSDDVIFTLDRA------ 110
             +V  LATKWD   +   + F LR+GVK+H  K F       +DDV+FT +R       
Sbjct: 70  TGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDPDHP 129

Query: 111 --GSVPNSPGGFGGFM--RNIASVEADGDNAVIISTKAPAPTLPGDLAN--IAIVSRHAG 164
              + P     F G    +NIA VE    + V+++          ++A    AI+S    
Sbjct: 130 FRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYA 189

Query: 165 EGADTADYNS--GKAAIGTGAFRLTTFKQGIEVGLERNPDWWG-KKVAWDHATYRMISSA 221
           E    A   S   +  IGTG F    +++  ++    N  +W   +V  D   + + + A
Sbjct: 190 EQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFAINTDA 249

Query: 222 SARTTAALAGDVDVIDAPAATDIARFKTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKG 281
           S R     AG+  V   P   D+   K   NL  ++ PG  + Y+A +            
Sbjct: 250 SVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVR---------- 299

Query: 282 PKGEALDNNPLADPRVRNALSEAINREGIVDKIMEGTATASGQWLPKGAFSYTPDIQPPK 341
                  + P     VR AL  A+N++ I++ + +G    +   +P   +SY   I+   
Sbjct: 300 -------HKPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAA 352

Query: 342 PDAAGAKKLLADAGYPDGFQLT---VHVPNDRYPNAPAVVQAVAQMWTRIGVKTNVEALP 398
            +   AK+LL  AG  +G ++T   + V     PNA  + + +   W +IG+K  + +  
Sbjct: 353 YNPEKAKELLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYE 412

Query: 399 WTTFSSR--KSEFAMKLLGLGNATYDASSMLVNVLGTVDPKRGLGAANDSGYSNPALDDL 456
           W  +  R    E  + L+G      D      N LGT+     +G  N S + +PA D L
Sbjct: 413 WGEYIKRTKNGEHDVSLIGWTGDNGDPD----NWLGTLYSCDAIGGNNYSMWCDPAYDKL 468

Query: 457 VSKAMMIYDDKAREAALIEAVKVAITDGAIIPL 489
           + +A ++ D + R     +A ++      I P+
Sbjct: 469 IKQAKVVTDREQRTVLYKQAQQLLKQQVPITPV 501