Pairwise Alignments

Query, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 543 a.a., Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  149 bits (377), Expect = 2e-40
 Identities = 136/501 (27%), Positives = 208/501 (41%), Gaps = 60/501 (11%)

Query: 4   TGVLLLTSLIGLVAQPVMAKNLTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTERTAE 63
           T +  LT   G V+    AK L     G+  +  P       +  +  Q+++ + E    
Sbjct: 20  TAIAALTLACGAVS----AKTLVYCSEGSPENFYPGMNTTGTSFDVTTQVYNTIVEFERG 75

Query: 64  G-RLVEGLATKWDTVSE-TKWRFALRDGVKWHDG-------KPFTSDDVIFTLDR----- 109
           G ++V GLA KWD  ++ T + F LR GVKWH         + F +DD IF L+R     
Sbjct: 76  GTKVVPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFNADDFIFMLERQWKES 135

Query: 110 -----AGSVPNSPGGFGGFMRNIASVEADGDNAVIISTKAPAPTLPGDLANIAIVSRHAG 164
                  S  +S     G  + + +V+   D  V I    P       LAN+A+  ++AG
Sbjct: 136 DPFFKVTSQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLNQPEAPF---LANLAM--QYAG 190

Query: 165 EGADTADYNSGKAA---------IGTGAFRLTTFKQGIEVGLERNPDWWGKKVAWDHATY 215
             +        KA          IGTG F L  +++   +  +  P +WG K   D   +
Sbjct: 191 IQSKEYAIAMLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYWGGKAKIDDLVF 250

Query: 216 RMISSASARTTAALAGDVDVIDAPAATDIARFKTTANLSFVSTPGLRVIYLAPSTSGDAW 275
            +   AS R      G+  V+  P   D+   +   N+  +  PGL V YL+ +T+    
Sbjct: 251 AITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGYLSYNTT---- 306

Query: 276 KAFVKGPKGEALDNNPLADPRVRNALSEAINREGIVDKIMEGTATASGQWLPKGAFSYTP 335
                          P  D RVR A++ AIN++ I+D +   T  A+   +P   +SY  
Sbjct: 307 -------------KKPFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPPTMWSYND 353

Query: 336 DIQPPKPDAAGAKKLLADAGYPDGFQL---TVHVPNDRYPNAPAVVQAVAQMWTRIGVKT 392
            ++    D   AKKLLA AGYPDGF      + V     PNA  + + +     +I VK 
Sbjct: 354 AVKDDPYDPEAAKKLLAQAGYPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKA 413

Query: 393 NVEALPWTTFSSR--KSEFAMKLLGLGNATYDASSMLVNVLGTVDPKRGLGAANDSGYSN 450
            +++  W  +  R    E  M +LG      D  + L  +LG    K   G +N S +  
Sbjct: 414 EIKSFEWGEYRKRLQAGEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASG-SNISKFCY 472

Query: 451 PALDDLVSKAMMIYDDKAREA 471
              +DLV KA        R+A
Sbjct: 473 QPYEDLVVKAKSTVKQADRDA 493