Pairwise Alignments

Query, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 512 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  326 bits (835), Expect = 1e-93
 Identities = 192/514 (37%), Positives = 287/514 (55%), Gaps = 16/514 (3%)

Query: 5   GVLLLTSLIGLVAQPV-MAKNLTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTERTAE 63
           G+L +  L+ L+  P+  A +LTIGL+ + TS+DP FY    N+A+A  +FD L  +  +
Sbjct: 3   GMLFVAGLMTLM--PIAQAADLTIGLASSTTSMDPQFYVGGANSAMARNLFDGLVNQNEK 60

Query: 64  GRLVEGLATKWDTVSETKWRFALRDGVKWHDGKPFTSDDVIFTLDRAG-SVPNSPGGFGG 122
            ++   LA  W  V++T W+F LR  VK+HDG  F++ DV+ ++ R   +  NSP  +  
Sbjct: 61  QQITPALAVSWKAVNDTTWQFTLRPNVKFHDGTDFSARDVVASVKRVALAAKNSPSAYTP 120

Query: 123 FMRNIASVEADGDNAVIISTKAPAPTLPGDLANIAIV-SRHAGEGADTADYNSGKAAIGT 181
           ++ +I  +       V I TK PA  L  +L+ IAI+ +R A +  D    N GK  IGT
Sbjct: 121 YVADIGEIREIDPLTVEIKTKGPAALLLNNLSRIAILPARLADQPTDVL--NGGKDVIGT 178

Query: 182 GAFRLTTFKQGIEVGLERNPDWWGKKVAWDHATYRMISSASARTTAALAGDVDVIDAPAA 241
           G F+  ++    +V L RN  +WG K  WD  T R+I ++SAR  A L+GDVD+I++   
Sbjct: 179 GPFKFVSYTPDDKVVLSRNDHYWGGKAEWDTVTLRVIKNSSARIAALLSGDVDMIESVPT 238

Query: 242 TDIARFKTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKGPKGEALDNNPLADPRVRNAL 301
            D A        +  S PG R++YL P    D    F KG  G+    NPL    VR A+
Sbjct: 239 ADRATIARQQAFATESVPGNRILYLHPDQDRDV-SPFAKGDDGK----NPLKKAEVRQAM 293

Query: 302 SEAINREGIVDKIMEGTATASGQWLPKGAFSYTPDIQPPKPDAAGAKKLLADAGYPDGFQ 361
           S AINR+ +V +I++G    S Q +P+G   Y+  I  P  D A AK+ LA AGYP+GF 
Sbjct: 294 SLAINRDALVQRILDGQGLPSSQLVPQGYPGYSAKIPAPVYDLAQAKQKLAAAGYPNGFT 353

Query: 362 LTVHVPNDRYPNAPAVVQAVAQMWTRIGVKTNVEALPWTTFSSR--KSEFAMKLLGLGNA 419
           LT H  NDRYPN   + QA+ QM+++ G+KT V  +P   + ++  + EF++ + G    
Sbjct: 354 LTFHASNDRYPNDAKIAQALGQMFSQAGIKTEVVTMPGNVYFAKAAQREFSLVMGGAAIE 413

Query: 420 TYDASSMLVNVLGTVDPKRGLGAANDSGYSNPALDDLVSKAMMIYDDKAREAALIEAVKV 479
           T +AS +L  +L T  P  G G  N   YSN   D L+++A    D++ R+A L +A ++
Sbjct: 414 TGEASGVLGPLLETFGPNAGQG--NRGRYSNAEFDKLLNQARATLDERQRDALLQQATEL 471

Query: 480 AITDGAIIPLYQQSNAWVLRKGLNYAPRIDERTL 513
           A+ +  +IPL   SN W ++KG +Y  R D  TL
Sbjct: 472 AMKEQGVIPLLFLSNTWAMKKGYSYVGRTDGYTL 505