Pairwise Alignments

Query, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 535 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  147 bits (372), Expect = 7e-40
 Identities = 137/516 (26%), Positives = 225/516 (43%), Gaps = 53/516 (10%)

Query: 1   MMKTGVLLLT-SLIGL-VAQPVMAKNLTIGLSGTVTSIDPHFYNASPN-NAIAMQIFDRL 57
           +MK+ VL  +  L+ L VA  V AK L     G+    +P  + +    +A ++ I++RL
Sbjct: 5   LMKSRVLKFSLGLLALSVAAGVQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSIPIYNRL 64

Query: 58  TE-RTAEGRLVEGLATKWDTVSETK-WRFALRDGVKWHDGKPF------TSDDVIFTLDR 109
            E +     +  GLA KWD  ++ K + F LR  VKW D K F       +DDV+F+  R
Sbjct: 65  VEFKNGTTEIEPGLAEKWDISADGKTYTFHLRKDVKWQDNKEFKPSRTFNADDVLFSFQR 124

Query: 110 AGSVPN-----SPGGFG-----GFMRNIASVEADGDNAVIIS-TKAPAPTLPGDLAN--I 156
                +     S G +      G    I+ +E   D  V    T+A AP L  DLA    
Sbjct: 125 QMDANHPFHKVSGGSYEYFEGMGMPDLISKIEKVDDYTVRFQLTRAEAPFL-ADLAMDFA 183

Query: 157 AIVSRHAGEGADTADYNS--GKAAIGTGAFRLTTFKQGIEVGLERNPDWWGKKVAWDHAT 214
           +I+S   G+    A          IGTG F+L  +++   +  +R   +WG K   D   
Sbjct: 184 SIMSAEYGDKMLKAGSPEKIDLDPIGTGPFQLQQYQKDSRILYKRFDSFWGTKPGIDRLV 243

Query: 215 YRMISSASARTTAALAGDVDVIDAPAATDIARFKTTANLSFVSTPGLRVIYLAPSTSGDA 274
           + +   AS R       +  V+  P   D+A  K   N+  +  PGL V YL+ +     
Sbjct: 244 FSITPDASVRYAKLQKDECQVMPYPNPADLASMKQDKNIELLQKPGLNVGYLSFN----- 298

Query: 275 WKAFVKGPKGEALDNNPLADPRVRNALSEAINREGIVDKIMEGTATASGQWLPKGAFSYT 334
                       ++  PL + +VR AL+ A+N++ I++ + +G   A+   +P   + Y 
Sbjct: 299 ------------VEKKPLDNVKVRQALTYAVNKQAIIEAVYQGAGQAAKNLIPPTMWGYN 346

Query: 335 PDIQPPKPDAAGAKKLLADAGYPDGFQL---TVHVPNDRYPNAPAVVQAVAQMWTRIGVK 391
            D++    D A AK LL +AG  +GF++    + V     PNA  + + +   W ++GVK
Sbjct: 347 DDVKDYAYDPAKAKALLKEAGLENGFEIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVK 406

Query: 392 TNVEALPWTTFSSR--KSEFAMKLLGLGNATYDASSMLVNVLGTVDPKRGLGAANDSGYS 449
             +    W  +  R    E    L+G      D  + L  +      K+G   +N S + 
Sbjct: 407 AKIVTYEWGEYLKRAKAGEHQTVLMGWTGDNGDPDNFLATLFSCDAAKKG---SNYSKWC 463

Query: 450 NPALDDLVSKAMMIYDDKAREAALIEAVKVAITDGA 485
               +DL+  A  +  D+A+   L +  +V + D A
Sbjct: 464 YKPFEDLIQPARAV-SDQAKRIELYKQAQVVMHDQA 498