Pairwise Alignments

Query, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 533 a.a., ABC transporter substrate-binding protein from Bosea sp. OAE506

 Score =  227 bits (578), Expect = 9e-64
 Identities = 167/531 (31%), Positives = 257/531 (48%), Gaps = 32/531 (6%)

Query: 7   LLLTSLIGLVAQPVMAKNLTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTERTAEGRL 66
           LL  SL+ L A    A+ L    +G   +IDPH  N  P  ++   I++ LTER   G+L
Sbjct: 12  LLGVSLLALGAAE--ARPLKWAAAGDALTIDPHGQNEGPTTSLNQHIYESLTERDHAGKL 69

Query: 67  VEGLATKWDTVSE--TKWRFALRDGVKWHDGKPFTSDDVIFTLDRAGSVPNSPGGFGGFM 124
           +  LA+ W  + +  T W F L  GVK+HDG PFT+DDV+F+ +RA   P S   F G++
Sbjct: 70  LPLLASSWRVLPDDPTTWEFKLESGVKFHDGAPFTADDVVFSYERAMQ-PTSD--FKGYL 126

Query: 125 RNIASVEADGDNAVIISTKAPAPTLPGDLANIAIVSRHAGE---GADTADYNSGKA---- 177
            ++  V    D  V I TK P P L  + ++I I+S+   E        D+ + +     
Sbjct: 127 TSVEKVSKVDDLTVRIKTKGPNPLLVNNTSSIRIMSKAWAEKNNAVKAQDFKNKEENFAV 186

Query: 178 --AIGTGAFRLTTFKQGIEVGLERNPDWWGK-KVAWD--HATYRMISSASARTTAALAGD 232
             A GTG F L + +  ++  L+RN  +W K KV  +    T   I   + R  A L+G+
Sbjct: 187 RNANGTGPFTLVSREADVKTVLKRNDAYWNKAKVPLEITELTLVPIKQDATRVAALLSGE 246

Query: 233 VDVIDAPAATDIARFKTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKGPKGEALDNNPL 292
           VD +      DIAR K   NL   S    R I+       D   A +KG   +    NP 
Sbjct: 247 VDFVQDVPVQDIARLKNQQNLRVNSGAENRTIFFGM----DVASADLKGD--DVQGKNPF 300

Query: 293 ADPRVRNALSEAINREGIVDKIMEGTATASGQWLPKGAFSYTPDIQP-PKPDAAGAKKLL 351
           AD +VR AL+ AINR  I   +M G +  +G  +P     +T ++   P  D A AK LL
Sbjct: 301 ADKKVRQALNMAINRPAIQRVVMRGESVPTGVIMPPFVNGWTKELDSFPAVDNAKAKALL 360

Query: 352 ADAGYPDGFQLTVHVPNDRYPNAPAVVQAVAQMWTRIGVKTNV----EALPWTTFSSRKS 407
           A+AGYP+GF +T+H PNDRY N   + QA   M+ +IGVK N+    +++ +        
Sbjct: 361 AEAGYPNGFSVTLHCPNDRYVNDEGICQAAVGMFGQIGVKVNLVSQSKSIHFNLIQKNPP 420

Query: 408 EFAMKLLGLGNATYDASSMLVNVLGTVDPKRGLGAANDSGYSNPALDDLVSKAMMIYDDK 467
           E    L+G G  TYD+  +   +  +    +  G+ N +G+ N  +D ++       D  
Sbjct: 421 ETEFYLVGWGVPTYDSDYIFSYMYHSRTGSQ--GSWNATGFKNAEVDTMIQSLSQEVDIP 478

Query: 468 AREAALIEAVKVAITDGAIIPLYQQSNAWVLRKGLNYAPRIDERTLAKDVS 518
            R+A + +       +   +P++ QS ++ ++  L+    +      K VS
Sbjct: 479 KRDATIAKLWARLKDETIYLPIHHQSLSYAMKTSLDIPVDVGNNPKLKMVS 529