Pairwise Alignments

Query, 376 a.a., ABC transporter nucleotide binding/ATPase (spermidine/putrescine) from Agrobacterium fabrum C58

Subject, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  217 bits (553), Expect = 4e-61
 Identities = 129/327 (39%), Positives = 188/327 (57%), Gaps = 6/327 (1%)

Query: 27  PVLQLVDVRKIFGDFAAVDGISVDIKEGEFVTIVGPSGSGKTTLLRMLAGMESPSEGYIT 86
           P L L  + K +    A   +S+ + +GEF++++GPSG GKTT+LRM+AG+  P+ G I 
Sbjct: 2   PALTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRIL 61

Query: 87  LRGEVINSVPADKRPTCLVFQSLALFPHKTVGENIEFPLKVRKMPAAERRIRALEFMRMV 146
           + G  I ++P ++R   LVFQS ALFPH +V EN+ F L+ + M  +E + R  + +  V
Sbjct: 62  VDGRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALASV 121

Query: 147 RLPESYYSKNVMRCSGGEKQRVALARAFAYDPDVLFFDEPLSALDYKLKKVLEKELKDLH 206
           RL  +   +   + SGG++QRVA+AR+ A  P +L FDEPLS LD  L+  ++ ELK L 
Sbjct: 122 RL-SALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRLQ 180

Query: 207 RESGKTFVYITHSLEEAMVMSDRVGVMSRGHLVQIGTPEEIYTKPATRFVAEFFGEVNSF 266
           RE G T +++TH   EAM MSDRV V++ G + Q  TPE IY +PAT FVA F G  N  
Sbjct: 181 REVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGRPNRL 240

Query: 267 E---VKRKGEGAWTLADGKPITVAPVAEAI--GETATVIVRPETMRFITGASSADNLISG 321
               V+  G  A    D  P+  A  AE +  G    V++R E +RF    S     ++G
Sbjct: 241 TGRVVRANGASAAVQLDDGPMLPASAAEGMVQGAAVDVVIRQEDIRFADAPSPGAATLAG 300

Query: 322 TIYNEYSLGSRMQYQVHSGDRIYLVEA 348
            +     +G+R+QY +  G    + EA
Sbjct: 301 RVAMRSFVGARVQYLLAFGGTELIAEA 327