Pairwise Alignments

Query, 268 a.a., ABC transporter membrane spanning protein (spermidine/putrescine) from Agrobacterium fabrum C58

Subject, 297 a.a., spermidine/putrescine ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 15/249 (6%)

Query: 11  AFVKAWTAFVVLAVYLPILCGALAGLSKGRYFGFPIRVF---STEWWGKTLASLEIQTLV 67
           +F K      +L +YLP+L   +   +  +     + V+   S +W+   L + ++   V
Sbjct: 5   SFSKLMLVLGLLFIYLPMLILVIYSFNASKL----VTVWGGWSIKWYVGLLDNSQLMGSV 60

Query: 68  QNSILIAFIVTLVSVILAFFGALAFARY-EWKGRKLFQKAILLPVFFPQPVLGLALLLWF 126
             S+ IA    + +V L    A    R   +KGR LF   +  P+  P+ + GL+LLL F
Sbjct: 61  MRSLEIACYTAVAAVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLLF 120

Query: 127 NALGINPSWQ------TAVVAHLVWIVPVVTLVIAIQVYSFDPTLEEAARDLGASRWFIL 180
            A+     W       T  +AH  +    V +V++ ++   D ++EEAA DLGA  W + 
Sbjct: 121 VAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKVF 180

Query: 181 REITLPILWPGIWSGALFAFLLSWGNFPLSLYTAGVDS-TIPKWLYSKMVAGYSPMVPAL 239
             IT+P++ P + +G + +F LS  +  L+ + +G  S T+P  ++S +  G  P + A+
Sbjct: 181 FLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAV 240

Query: 240 GTMSTLSAA 248
            ++  LS +
Sbjct: 241 ASLILLSVS 249