Pairwise Alignments

Query, 268 a.a., ABC transporter membrane spanning protein (spermidine/putrescine) from Agrobacterium fabrum C58

Subject, 269 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 6e-28
 Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 4/253 (1%)

Query: 17  TAFVVLAVYLPILCGALAGLSKGRYFGFPIRVFSTEWWGKTLASLEIQTLVQNSILIAFI 76
           T  +   + LP++   L      ++  FP   ++ +W+G+  ++ E       S+ +A +
Sbjct: 20  TGVIAAFLLLPVVFIVLLSFGSSQWLVFPPPGWTFKWYGQFFSNPEWMDAALASLKVAVL 79

Query: 77  VTLVSVILAFFGALAFARYEWKGRKLFQKAILLPVFFPQPVLGLALLLWFNALGINPSWQ 136
            T+ +V+L    A A  R  + GR+L      +P+  P  ++ +A+   F  LG   +  
Sbjct: 80  TTIAAVLLGLPSAFALVRGRFPGRELLYGLFTMPMIVPLVIIAVAVYALFLKLGYTGTLF 139

Query: 137 TAVVAHLVWIVPVVTLVIAIQVYSFDPTLEEAARDLGASRWFILREITLPILWPGIWSGA 196
             VV+H++  +P   + I   +  FD ++E+AA   GASR   + ++T P + PG+ +G 
Sbjct: 140 AFVVSHVIVALPFTIISIINSLKLFDQSIEDAAVICGASRLQAIFKVTFPAIRPGMIAGG 199

Query: 197 LFAFLLSWGNFPLSLYTAGVD-STIPKWLYSKMVAGYSPMVPALGTMSTLSAAALLLAGG 255
           LFAFL+SW    LS+  A  D  T+P  +++ +    SP++      STL     LL   
Sbjct: 200 LFAFLVSWDEVVLSVMMASPDLQTLPVKMWTTLRQDLSPVI---AVASTLLIGLSLLVMF 256

Query: 256 LTIMLVRRRQADA 268
           +   L RR + +A
Sbjct: 257 IAAALRRRTETNA 269