Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 300 a.a., HTH-type transcriptional regulator PgrR from Pseudomonas sp. DMC3

 Score =  216 bits (549), Expect = 7e-61
 Identities = 123/294 (41%), Positives = 164/294 (55%), Gaps = 4/294 (1%)

Query: 11  NDLAAFSAFLAVATHRSFRSAADELNMTPSAISHSIKVLEERLNVRLFNRTTRSVSLTEA 70
           NDL AF   + VA   SF  AA +L +T SA+S  +  LE RL +RL  RTTRSVSLT A
Sbjct: 7   NDLLAF---VTVARSGSFTRAAVQLGVTQSAVSQVVSALEARLKIRLLTRTTRSVSLTAA 63

Query: 71  GERLASKLKPAMASIEEAVQELEGNGPVPSGTVRINASEGAIRLVLRPVLAPFLREYPQV 130
           GERL   +      IE  +  L      P+GTVRI   +  I+  L P L P L +YP +
Sbjct: 64  GERLLHTVGHRFDEIEAELDALTELRDKPAGTVRITCGDNIIKTTLLPKLTPLLLQYPDI 123

Query: 131 HLDIVSDGRLSDIVADGFDAGIRLAEAVPKDMVAIPVMGEVRFAAVASPEYFERRGYPLI 190
            L+   +    DIVAD FDAG+R ++ V +DM+A+P+   +R A VASP YF R   P  
Sbjct: 124 KLEFDINYGFRDIVADRFDAGVRFSDTVAQDMIAVPIGPPLRMAVVASPGYFARHPAPQH 183

Query: 191 PQDLHSHDCIRFRFES-GAIYRWEFERMGASERINVSGPLTLSDQPLMVEAAIDGIGIAF 249
           P+DL +H CI  RF +   +  WEFER G   ++ V G L  +    + +AA++G+GIA+
Sbjct: 184 PRDLAAHRCIDIRFPTYDGVDAWEFERQGKKLKVRVDGQLVFNSTVHIADAAVNGLGIAY 243

Query: 250 VPDHLATEALEHGRLERVLEDWCPALPGLCLYYSGRRHVSSGLRALINMLTHRP 303
           +P+      L  GRL RVLEDWC    G  LYY  RR  S     +++ L   P
Sbjct: 244 LPEDEFGAHLAEGRLVRVLEDWCEPFGGFHLYYPSRRQPSPAFSLVVDALRVDP 297