Pairwise Alignments

Query, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

Subject, 321 a.a., histidine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 35/235 (14%)

Query: 6   KSFALLASTIVAASLPVLSSASAAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEAL-- 63
           K    L +T+++A +   + A AA     GK ++FA     G N+    ++T   + +  
Sbjct: 2   KMHKTLMATLLSAGVLASAGAQAAGWCESGKPVKFA-----GLNWESGMLLTDILQTVLE 56

Query: 64  -GYKVKLSTV--NTTLFFQAVAQGDLDIATDINFPQREPGFRKVADKADMIGK------- 113
            GY  K  ++  N+     A++  D+ +     F +   G  +V +KA+  GK       
Sbjct: 57  KGYDCKTDSLPGNSITMENALSSNDIQV-----FAEEWVGRSEVWNKAEKAGKVVGVGAP 111

Query: 114 --GLIEGGGINGYLID-----KKTADAYNIKTLDQMKDPKIAALFGTD---GKADLINCD 163
             G IEG  +  Y+I+     K  A A ++K +  +   K A++F       K    NC 
Sbjct: 112 VVGAIEGWYVPRYVIEGDAKRKLEAKAPDLKNIADLA--KYASVFKDQEEPSKGRFYNCP 169

Query: 164 PGWSCGDVVEYQLDKFGLKDTVKSVR-GKYEALMVEAVARAKRGEPVFFYAWSPS 217
            GW+C       L  +GL+ T  + R G   AL    ++  KRGEP+ FY WSP+
Sbjct: 170 AGWTCELDNSEMLKSYGLESTYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPT 224