Pairwise Alignments

Query, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

Subject, 321 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score = 67.4 bits (163), Expect = 5e-16
 Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 41/238 (17%)

Query: 6   KSFALLASTIVAASLPVLSSASAAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEAL-- 63
           K    L +T+++A L   + A AA     GK ++FA     G N+    ++T   + +  
Sbjct: 2   KMHKTLLATLLSAGLLASAGAQAAGWCESGKPVKFA-----GLNWESGMLLTDILQTVLE 56

Query: 64  -GYKVKLSTV--NTTLFFQAVAQGDLDIATDINFPQREPGFRKVADKADMIGK------- 113
            GY  K  ++  N+     A++  D+ +     F +   G  +V +KA+  GK       
Sbjct: 57  KGYDCKTDSLPGNSITMENALSSNDIQV-----FAEEWVGRSEVWNKAEKAGKVVGVGAP 111

Query: 114 --GLIEGGGINGYLID--------KKTADAYNIKTLDQMKDPKIAALFGTD---GKADLI 160
             G IEG  +  Y+I+         K  D  NI  L      K A++F       K    
Sbjct: 112 IVGAIEGWYVPRYVIEGDAKRKLEPKAPDLKNIADL-----AKYASVFKDQEEPSKGRFY 166

Query: 161 NCDPGWSCGDVVEYQLDKFGLKDTVKSVR-GKYEALMVEAVARAKRGEPVFFYAWSPS 217
           NC  GW+C       L  +GL+ T  + R G   AL    ++  KRGEP+ FY WSP+
Sbjct: 167 NCPAGWTCELDNSEMLKSYGLESTYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPT 224