Pairwise Alignments

Query, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

Subject, 330 a.a., glycine betaine/L-proline ABC transporter substrate-binding protein ProX from Escherichia coli ECOR27

 Score =  192 bits (488), Expect = 1e-53
 Identities = 116/338 (34%), Positives = 169/338 (50%), Gaps = 19/338 (5%)

Query: 13  STIVAASLPVLSSAS--AAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEALGYKV-KL 69
           S + A +   L S    AA+LPG G T+   QS      +    +V++  E LGY V K 
Sbjct: 4   SVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTL-LVSRALEKLGYTVNKP 62

Query: 70  STVNTTLFFQAVAQGDLDIATDINF-PQREPGFRKVADKADMIGKGLIEGGGINGYLIDK 128
           S V+  + + ++A GD    T +N+ P  +  +           +G+   G   GYLIDK
Sbjct: 63  SEVDYNVGYTSLASGDATF-TAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDK 121

Query: 129 KTADAYNIKTLDQMKDPKIAALFGT--DGKADLINCDPGWSCGDVVEYQLDKFGLKDTVK 186
           KTAD Y I  + Q+KDPKIA LF T  DGKADL  C+PGW C   + +QL  + L  TV 
Sbjct: 122 KTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTHTVT 181

Query: 187 SVRGKYEALMVEAVARAKRGEPVFFYAWSPSWMNKALQPGKDVVWLPTPFDALPPSVPSS 246
             +G Y A+M + ++R K G+PVF+Y W+P W++  L+PGKDVVWL  PF ALP      
Sbjct: 182 HNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALP-----G 236

Query: 247 GTNAVANVEGCAGAANPCRMAMAAWNWTAVGNKEFLKENPEVKSFVENMSFPLSTWSSWE 306
             NA   +   A    P            V NK + ++NP        M  P++  ++  
Sbjct: 237 DKNADTKLPNGANYGFPVS------TMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQN 290

Query: 307 QAISQKGGSDATVRGLSDAWLSENKALLDGWITAAKSA 344
             +     S+  ++G  D W+  ++   DGW+  A +A
Sbjct: 291 AIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAA 328