Pairwise Alignments

Query, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

Subject, 332 a.a., glycine betaine/L-proline ABC transporter substrate-binding protein ProX from Dickeya dianthicola ME23

 Score =  202 bits (514), Expect = 1e-56
 Identities = 119/342 (34%), Positives = 179/342 (52%), Gaps = 20/342 (5%)

Query: 7   SFALLASTIVAASLPVLSSASAAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEALGYK 66
           S A LA T V ++       +A +LPG G T++  QS +L        +V+K  E LGY 
Sbjct: 5   SMATLALTTVLST----GLFAADDLPGKGITVKPVQS-TLSEETFQTLLVSKALEKLGYT 59

Query: 67  V-KLSTVNTTLFFQAVAQGDLDIATDINF-PQREPGFRKVADKADMIGKGLIEGGGINGY 124
           V K S V+  + + +VA GD    T +N+ P  +  ++          KG+   G   GY
Sbjct: 60  VDKPSEVDYNVGYTSVANGDATF-TAVNWQPLHDDMYQAAGGDTTFYRKGVYVSGAAQGY 118

Query: 125 LIDKKTADAYNIKTLDQMKDPKIAALFGT--DGKADLINCDPGWSCGDVVEYQLDKFGLK 182
           LIDKKTA+ Y+I  LDQ+KDP++A LF T  DGKADL  C+PGW C  V+ +QL  +GL 
Sbjct: 119 LIDKKTAERYHITRLDQLKDPQLAKLFDTNGDGKADLTGCNPGWGCEGVINHQLQAYGLG 178

Query: 183 DTVKSVRGKYEALMVEAVARAKRGEPVFFYAWSPSWMNKALQPGKDVVWLPTPFDALPPS 242
           +TV   +G Y AL+ + +AR K+G+P+ ++ W+P W++  L PG DVVWL  PF +LP  
Sbjct: 179 NTVNHNQGNYAALIADTIARYKQGKPILYFTWTPYWVSDVLVPGHDVVWLQVPFSSLPGK 238

Query: 243 VPSSGTNAVANVEGCAGAANPCRMAMAAWNWTAVGNKEFLKENPEVKSFVENMSFPLSTW 302
              + T             N         +   V NK++ ++NP   +    M  PL+  
Sbjct: 239 QKGTDTK----------LPNGANYGFPVSSMHIVANKDWAEKNPAAATLFATMKLPLADI 288

Query: 303 SSWEQAISQKGGSDATVRGLSDAWLSENKALLDGWITAAKSA 344
           ++    + Q   S   +    + W+  ++A  DGWI AA++A
Sbjct: 289 NAQNLRMHQGEASQEAIERHVNGWIKAHQAQFDGWINAARAA 330