Pairwise Alignments

Query, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

Subject, 332 a.a., glycine betaine/L-proline ABC transporter substrate-binding protein ProX from Dickeya dadantii 3937

 Score =  204 bits (518), Expect = 3e-57
 Identities = 119/342 (34%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 7   SFALLASTIVAASLPVLSSASAAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEALGYK 66
           S A LA T V ++       +A +LPG G T++  QS ++        +V+K  E LGY 
Sbjct: 5   SMATLALTTVLST----GLFAADDLPGKGITVKPVQS-TISEETFQTLLVSKALEKLGYT 59

Query: 67  V-KLSTVNTTLFFQAVAQGDLDIATDINF-PQREPGFRKVADKADMIGKGLIEGGGINGY 124
           V K S V+  + + ++A GD    T +N+ P  +  ++     A    +G+   G   GY
Sbjct: 60  VDKPSEVDYNVGYTSIANGDATF-TAVNWQPLHDDMYQAAGGDAKFYRQGVYVSGAAQGY 118

Query: 125 LIDKKTADAYNIKTLDQMKDPKIAALFGT--DGKADLINCDPGWSCGDVVEYQLDKFGLK 182
           LIDKKTA+ Y+I  LDQ+KDPK+A LF T  DGKADL  C+PGW C  V+ +Q+  +GL 
Sbjct: 119 LIDKKTAERYHITRLDQLKDPKLAKLFDTNGDGKADLTGCNPGWGCDSVINHQIQAYGLG 178

Query: 183 DTVKSVRGKYEALMVEAVARAKRGEPVFFYAWSPSWMNKALQPGKDVVWLPTPFDALPPS 242
           DTV   +G Y AL+ + +AR K+G+ V F+ W+P W++  L PG+DVVWL  PF +LP  
Sbjct: 179 DTVNHNQGNYAALIADTIARYKQGKSVIFFTWTPYWVSDVLVPGRDVVWLQVPFSSLPGK 238

Query: 243 VPSSGTNAVANVEGCAGAANPCRMAMAAWNWTAVGNKEFLKENPEVKSFVENMSFPLSTW 302
              + T             N         N   V NK++ ++NP        M  PL+  
Sbjct: 239 QKGTDTK----------LPNGANYGFPVNNMRIVANKDWAEKNPAAAKLFAIMKLPLADI 288

Query: 303 SSWEQAISQKGGSDATVRGLSDAWLSENKALLDGWITAAKSA 344
           ++    + Q   S   +    + W++ ++A  DGW+ AA++A
Sbjct: 289 NAQNLRMHQGEASQQDIERHVNGWINAHQAQFDGWLNAARAA 330