Pairwise Alignments

Query, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

Subject, 345 a.a., proline/glycine betaine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 102/361 (28%), Positives = 156/361 (43%), Gaps = 43/361 (11%)

Query: 3   LNFKSFALLASTIVAASLPVLSSASAAELPG---DGKTIRFAQSDSLGANYVVAKIVTKG 59
           LN K    LA+T    +L + + A AA   G    GKTI FA  D    +++    V K 
Sbjct: 2   LNSKLKIALATT----ALVMGAYAGAARAEGYCSAGKTITFAGIDWESGSFITE--VMKE 55

Query: 60  FEALGYKVKLSTV--NTTLFFQAVAQGDLDIATDINFPQREPGFRKVADKADM--IGK-- 113
             + GY  K+ ++  N+    QA A  D+ I  +  +  R   + K A+   +  +GK  
Sbjct: 56  ILSKGYDCKVDSIPGNSVTLEQATANNDVQIFAE-EWIGRSDVWNKAAEAGQVKSVGKTF 114

Query: 114 -GLIEGGGINGYLIDKK-----TADAYNIKTLDQMKDPKIAALF---GTDGKADLINCDP 164
            G  EG  +  YL+         A A ++K++DQ+ DPKI  LF       K   +NC  
Sbjct: 115 VGAAEGWFVPEYLVKGDPAKGIAAKAPDLKSVDQLSDPKIVELFRDPEEPTKGRFLNCPS 174

Query: 165 GWSCGDVVEYQLDKFGLKDTVKSVR-GKYEALMVEAVARAKRGEPVFFYAWSPSWMNKAL 223
           GW+C  V   +L  + L     + R G   AL     A   +GEP+ FY WSP+    A+
Sbjct: 175 GWTCEGVNTAKLQAYKLDGNYVNFRPGTGTALDAAIAAGYLQGEPMLFYYWSPT----AI 230

Query: 224 QPGKDVVWLPTPFDALPPSVPSSGTNAVANVEGCAGAANPCRMAMAAWNWTAVGNKEFLK 283
                ++ L  P  A   S     T+A    +  AG A P        N T      F K
Sbjct: 231 MGKYKLIQLQEP--AYSESCWKELTSADGKRD--AGCAFPSVEVAYGVNST------FAK 280

Query: 284 ENPEVKSFVENMSFPLSTWSSWEQAISQKGGSDATVRGLSDAWLSENKALLDGWITAAKS 343
           + PE+ + +E  +FPL+  ++    ++ K   DAT    +  +L     +  GW++A   
Sbjct: 281 DAPEIIAILEKATFPLAEINASLAYMTDK-QVDAT--AAAKTFLQTKADIWGGWVSADAK 337

Query: 344 A 344
           A
Sbjct: 338 A 338