Pairwise Alignments

Query, 363 a.a., ABC transporter nucleotide binding/ATPase (glycine betaine/L-proline) from Agrobacterium fabrum C58

Subject, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

 Score =  245 bits (626), Expect = 1e-69
 Identities = 149/347 (42%), Positives = 213/347 (61%), Gaps = 10/347 (2%)

Query: 3   VVGLNDVSLSVPAGAMYMIMGLSGSGKSTLARCINRLNEPTAGKILLDGR----DIVPLK 58
           VVG+   +L +  G + ++MGLSGSGKS+L RCIN LN  + GK+ ++      DI    
Sbjct: 40  VVGVEKANLDINKGEICVLMGLSGSGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIANCS 99

Query: 59  PAELRDIRRRRVSMVFQHFALLPNKTVIENAEFGLKMRGVPLQQRRERAEEILSIVGLAK 118
            AEL+ +R +R++MVFQ FAL+P  TV EN  FGL+M+G P ++RR+  +E L +VGL +
Sbjct: 100 AAELKMMRTKRIAMVFQKFALMPWLTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQ 159

Query: 119 WAKHYPHELSGGMRQRVGLARALATDADLLIMDEAFSALDPLIRSEMQDELLRLQRTLNK 178
           W    P ELSGGM+QRVGLARALA DAD+L+MDE FSALDPLIR  +QDELL LQ  L+K
Sbjct: 160 WRNKKPDELSGGMQQRVGLARALAMDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSK 219

Query: 179 TIVFITHDFQEALKLGTRIAIMKDGAVVREGTPQAIVADPRNDYVSAFTRDIDRSRVFEA 238
           TIVF++HD  EALKLGTRIAIMKDG +++   P+ IV +P ++YV  F    +   V   
Sbjct: 220 TIVFVSHDLDEALKLGTRIAIMKDGRIIQYSKPEEIVLNPADEYVRTFVAHTNPLNVLCG 279

Query: 239 RAVMQHCEALGR-SGEIQI-VGQTAGKTKRAGFALDPSGRVVGLLDQAALLQLDSGSSCE 296
           R++M+  +   R +G + +  G  +      G AL  + +    LD   + +   G   E
Sbjct: 280 RSLMRSLDNCKRVNGSVCLDPGIDSWLDLGEGGALKRARQGQNGLD---MQKWAPGQDVE 336

Query: 297 SLMSRDFVKIRENTKLIDAARMNRPQQPMAVVDEDDRFVGLLESDQI 343
            L  R  V +  +  + +A ++        V+ ++DR VG+L   ++
Sbjct: 337 LLERRPTV-VHADIGMREALQIRYQTGNKLVLQDNDRVVGILGDTEL 382