Pairwise Alignments

Query, 311 a.a., type IV secretion protein AvhB6 from Agrobacterium fabrum C58

Subject, 295 a.a., component of type IV secretion system from Agrobacterium fabrum C58

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 15/197 (7%)

Query: 27  IAEWVAGPLTVAVTLYVVLYGYLILRGSVQEPILDFAFRAMKLAIIVMLVKNAGEYQTYV 86
           I E V+ PL   VTL++++ G L++RG +         R + + ++V LV     Y  YV
Sbjct: 31  IQEAVSAPLVACVTLWIIVQGILVMRGEIDTR--GGITRVITVTVVVALVVGQANYHDYV 88

Query: 87  TNIFFDVLPREIAQALNAGTAPSASTFDSLLDKGQASATDIWTRASWPI------DIVTG 140
            ++F + +P  I Q   +G+     T  + LD   A     + R +  I      DI+  
Sbjct: 89  VSVFEETIPNFIQQF--SGSGLPLQTIPAQLDTMFALTQAAFQRIASEIGPMNDQDILAF 146

Query: 141 VGGIMVI-GVSFLVAGIGYVVSLYARLALAIVLAIGPIFIALAMFQSTRRFTESWIGQLA 199
            G   V  G  +   GI   V +  +    ++LAIGP+ +   +F  TR     WIGQL 
Sbjct: 147 QGAQWVFYGTLWSAFGIYDAVGILTK----VLLAIGPLILTGYIFDRTRDIAAKWIGQLI 202

Query: 200 NFVILQVLVVAVGSLLI 216
            + +L +L+  V +++I
Sbjct: 203 TYGLLLLLLNLVATIVI 219