Pairwise Alignments

Query, 275 a.a., transcriptional repressor of the blcABC operon from Agrobacterium fabrum C58

Subject, 271 a.a., HTH-type transcriptional repressor AllR from Escherichia coli ECRC99

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 2/247 (0%)

Query: 28  ALRRAVRILDLVAGSPRDLTAAELTRILDLPKSSAHGLLAVMTELDLLARSAD-GTLRIG 86
           AL R + IL  +  S    + ++++  LDLP S+   LL V+   D + + +  G   IG
Sbjct: 23  ALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIG 82

Query: 87  PHSLRWANGFLSHLDIVSTFNDHLAQRHDLDPYTVTLTVREGGEVVYIGCRNSAQPLGHT 146
                    ++ + D++S     + +   L   TV + +R G E V IG       +   
Sbjct: 83  LGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMC 142

Query: 147 FRIGMRLPAPFTATGKILLSDLGPGELRMLFSQFP-QPLTSRSVAGLSQLEEELALTRAR 205
             +G RLP   +  GK LL  L   EL  +  Q   Q  T  ++  +  L ++L   R  
Sbjct: 143 APLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQAREL 202

Query: 206 GYSIDDGQIREGMLCIGAAIRDYSGAASAGIAISLIRSEASDEKIASLGEELRTTANALS 265
           GY++D  +   G+ CI +AI D  G+  A I+IS   S  ++++  S GE +R TA  +S
Sbjct: 203 GYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDIS 262

Query: 266 EKLGYRS 272
             LG ++
Sbjct: 263 TALGLKA 269