Pairwise Alignments

Query, 285 a.a., ABC transporter membrane spanning protein (mannopine) from Agrobacterium fabrum C58

Subject, 264 a.a., ABC-type spermidine/putrescine transport system, permease component II from Variovorax sp. SCN45

 Score =  143 bits (360), Expect = 5e-39
 Identities = 79/237 (33%), Positives = 135/237 (56%)

Query: 37  FVFLITVFLILPTFLVVPMSLNDGSYLAFPPQGLTLKWYRAYFSDPDWMSATLFSLQVAF 96
           F  L+ VF++ P  +V  ++    + L  P    +L+W+ A F+ PD+M +   SL +A 
Sbjct: 11  FNALVIVFMLAPLVVVCIVAFTPENTLTIPTTRFSLRWFEAVFAHPDFMQSFWNSLWLAL 70

Query: 97  ATAIVATTIGTTAALALAKSRLPFKGLLQSLALGPMIVPHVVLGVSLYLVFSPWRVTGTF 156
           ++A +AT +   A +A+ +     +  L  L L P+IVPH+VLGV+L  +F+    TG+F
Sbjct: 71  SSATIATLLAVPAGMAITRYEFAGRDFLNGLFLSPLIVPHLVLGVALLRLFALVGGTGSF 130

Query: 157 AGFVLAHTVLAIPYVMIVVGAAVQKFDPSLELAALNCGANRFQSFFLVMLPNIGPSVAAA 216
              V+AH ++  PY + +V AA+  FD S E AAL+ GA++   F  + LP I P V   
Sbjct: 131 GWLVMAHALIVTPYTLRLVVAALVGFDRSAEQAALSLGASQATVFRRITLPMILPGVTGG 190

Query: 217 SVFAFLASFDDATVSFFISDIGGKSIGRKMFEDIDFNLTPVIAAASTVLVAISLVLM 273
            + AF+ SFD+ T+S F++     ++  +M+     ++ P++AA S ++VA++   M
Sbjct: 191 WMLAFINSFDEVTMSIFVTAPSTVTLPVRMYMYATESIDPLMAAVSALMVAVTACAM 247