Pairwise Alignments

Query, 350 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 90/325 (27%), Positives = 128/325 (39%), Gaps = 37/325 (11%)

Query: 20  SKPRRKRNPAQPQLLFNPMPDRVEPALEQLKAHPPQGDQWSWELKWDGYRLAVHIEPTGV 79
           S     +   QP   F   P +V          PP    W  E KWDG R  V      +
Sbjct: 198 SADEHNQRGGQPYPFFLAHPLQVSSDQFDTLLGPPS--DWQIEWKWDGIRAQVVKRDGQL 255

Query: 80  RILTRGGHDWTHRFPAIAEAARALGPATMIIDGEAVVL------DDEGRPDFGLLQKSLG 133
            + +RG    T RFP +   A+ L P  +++DGE +V        +     F LLQ+ +G
Sbjct: 256 WVWSRGEELVTERFPELHGLAQTL-PDGVVLDGEILVWKPGETETELAVQPFALLQQRIG 314

Query: 134 AS--GKAAGNRASDAILYAFDLMYLDGHDLREMEYRSRRHLLEDTIKANDGA-IRLSETL 190
               GK   N A   +L A+DL+   G D R      RR  LE  +  +  A + LS  L
Sbjct: 315 RKTLGKKLLNDA-PVVLQAYDLLEWQGEDWRSRPQHERRSQLEHLVDEHPLAPVLLSPLL 373

Query: 191 D----ADPNVLLEHIRSLGLEGIVGKHLDQPYRSGRAGD---WVKVKC--IESEAFMVV- 240
                AD     E  RSLG+EG++ K  +  Y  GR  D   W K K      +A ++  
Sbjct: 374 QGPDWADLARQREQSRSLGVEGLMLKQREALYGVGRTKDMGIWWKWKIDPFSVDAVLIYA 433

Query: 241 ----GYEPSMASPAGFASL-VVAAYRGDELIHVGNVGTGFKEAEMIGLRKMLDKLRWKRK 295
               G   S+ S   FA     A   G  L+      +G  + EM  +  ++ K   +  
Sbjct: 434 QRGHGRRASLYSDYTFAVWDAPAGTPGRALVPFAKAYSGLSDEEMRKVDAIIRKTTVETF 493

Query: 296 PPPVPFTEKTDIVWVEPTLIAEIEF 320
            P         +  V PTL+ E+ F
Sbjct: 494 GP---------VRSVTPTLVFELGF 509