Pairwise Alignments

Query, 353 a.a., LacI family transcription regulator from Agrobacterium fabrum C58

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  179 bits (455), Expect = 7e-50
 Identities = 118/337 (35%), Positives = 184/337 (54%), Gaps = 8/337 (2%)

Query: 17  ATIKDVAFAAGVSISTASKALNERGRMAAETRERIQSVAQQLGFRPNAMARALVGQRSFT 76
           ATIKDVA  AG+S +T S  LN+   ++ + R ++++   +L + P+A+AR+L  + + T
Sbjct: 2   ATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTAT 61

Query: 77  LGLLTNDTYGRFTLPIAAGLSAAMADRGVSVFLCAIDDEPERVRLSLEAMEDKRVDGLVV 136
           +GLL  ++   +   +A G+  A    G  V LC  DD P++ R  L  + +KR+DGLVV
Sbjct: 62  IGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLVV 121

Query: 137 SGKRIDRVLPVDIPTVHMPVVYVNAACPEGAIGFVP-DDEGGAHAAVSHLVGLGRKRIAH 195
           +    D  L   + +V  P+V V+          V  D E GA+ A  HL+ LG + +A+
Sbjct: 122 ASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVAY 181

Query: 196 VTGPRSFSAVSLREKGWRRALSEAALPCFGD-VLSGEWSEAFGYAAGQRFVASPISERPD 254
           + GP       LR  G+RRA++EA  P  G  VL  +++   G+AA  + +     +RP 
Sbjct: 182 IGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE---GKRPS 238

Query: 255 AVFCGNDQIARGVIDALALSGIRVPEDIAVVGFDNWEIFATATRPPLTTVDMALKELGRQ 314
           A+F GND I  GV+ A A   I VP +++V+GFD+ E+ +    P LTTV  +++ELG  
Sbjct: 239 AIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIEL-SRYVYPSLTTVGQSIRELGES 297

Query: 315 AGLTLLDMIDGKPVETGQRRLPC-RLKVRESCGSPAP 350
           A   LL  I        ++R+   R+ +RES G P P
Sbjct: 298 AASLLLTRIATPRQGAAEQRIVAPRIVLRESTG-PRP 333