Pairwise Alignments

Query, 304 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 299 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  190 bits (482), Expect = 4e-53
 Identities = 101/285 (35%), Positives = 161/285 (56%), Gaps = 11/285 (3%)

Query: 29  LTGDPASLFLPVEA--SAEMKAEFRALHGLDQPLLVQFVQYVGNVMTGDLGESLRKARPA 86
           + GDP  L +  +   + E     + L+GLD+P   ++++++G V+ G+LG S   ARP 
Sbjct: 12  MPGDPIDLMIAGDPRLTPEDAVRLKVLYGLDRPWTERWLRWLGQVLQGELGYSRLYARPV 71

Query: 87  LDVVLEAFTWTLWLAVITMTLVTICAIVVGSLAAFRTGGFFDRFSSMVSLIGASVPDFWL 146
           LD +  A   +  L +  M L    AI +G LA+ R GG  DR  ++ +    SVP FWL
Sbjct: 72  LDAMAPALGNSALLMLSAMALSLSLAIPLGILASLRPGGLVDRLVNLAAFASVSVPVFWL 131

Query: 147 AIVAIVVFAIQLSWLPTSG---------TGTLSHWILPICVLFVRPFGIIVQVVRGSMIS 197
            ++ IVVFA+ L WLP  G         T  L H +LP+  L +   G   + +R +MI 
Sbjct: 132 GLMLIVVFAVSLGWLPAGGVESVGDGGPTDRLRHMVLPVSALALAGIGQATRHMRAAMIG 191

Query: 198 ALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVIGDQAASLLNGAVVIETIFGFPGV 257
              + Y++TARAKG     I+  H LRNA+LP+ T+I  +   L +GA++ ET+F +PG+
Sbjct: 192 EAGADYIRTARAKGCGPARIVLRHQLRNALLPITTIIALEFGGLFSGALITETVFAWPGM 251

Query: 258 GKLMIDSILQRDFNVVLAAILVTAFAIFLMNLVIDLAYALLDPRI 302
           G+L+ ++++  DFN+ L+ +L+        +++ D+AY  LDPRI
Sbjct: 252 GRLIYEAVMGNDFNLALSGLLLATAMTLAGSILADMAYQRLDPRI 296