Pairwise Alignments

Query, 315 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  189 bits (479), Expect = 9e-53
 Identities = 108/298 (36%), Positives = 170/298 (57%), Gaps = 3/298 (1%)

Query: 6   PNTVDNSAAKEPVIEEASAFVRMARMLWADKFALCAAIFLILVIILAIIGPTLLNELATK 65
           P +V  ++  +  +   S +    +    +K A+    F+ LV+  A+  P +     ++
Sbjct: 6   PKSVSPASPVDQSLLYPSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSE 65

Query: 66  QNLRGRNLAPFDFSR--EWFMWLGADALGRPLWPRIIVATQNTIMVAAGAVFISAVVGTL 123
           Q  R   L P  +     W   LG D LGR L  R+I   + ++++   +V +S + G L
Sbjct: 66  Q-YRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGIL 124

Query: 124 LGLIAGFSSQRTSQIIMRLADVIMSFPSLLVAVIVLYILGSSILNLMLVLSITRIPVYLR 183
           LGL+AGF  Q     IMRL DV+++ PSLL+AV ++ ILG  ++N ++ ++I  +P Y+R
Sbjct: 125 LGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVR 184

Query: 184 TTRAEVMEIRSRMFVQAARVMGASSKRILFRHILPVVLPTLTTLATLDFAYVMLAESALS 243
            TRA VM   +R +V AAR+ GA   R++F  +LP  +  L   ATL F+  +L  +AL 
Sbjct: 185 LTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALG 244

Query: 244 FLGIGIQPPEITWGLMISQGRQYLTNAWWLSFWPGLAIILTTLSLNLLSNWLRIALDP 301
           FLG+G+QPP   WG M++  R Y+  AWW+   PGL I+L+ L++NL+ + LR ALDP
Sbjct: 245 FLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDP 302