Pairwise Alignments

Query, 315 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  186 bits (472), Expect = 6e-52
 Identities = 97/292 (33%), Positives = 158/292 (54%), Gaps = 5/292 (1%)

Query: 10  DNSAAKEPVIEEASAFVRMARMLWADKFALCAAIFLILVIILAIIGPTLLNELATKQNLR 69
           + ++A  P  +      ++  ML      +  A+ ++L++++ I  P L        +L 
Sbjct: 5   EETSAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLT 64

Query: 70  GRNLAPFDFSREWFMWLGADALGRPLWPRIIVATQNTIMVAAGAVFISAVVGTLLGLIAG 129
            R L P         W G D +GR L+ R++V +Q +I+     V I+ ++G+LLG ++G
Sbjct: 65  ARLLPPSAAH-----WFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSG 119

Query: 130 FSSQRTSQIIMRLADVIMSFPSLLVAVIVLYILGSSILNLMLVLSITRIPVYLRTTRAEV 189
               R   IIMR+ D+++S PSL++ + +   LG S+ N ML ++I RIP Y+R  R + 
Sbjct: 120 VLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQA 179

Query: 190 MEIRSRMFVQAARVMGASSKRILFRHILPVVLPTLTTLATLDFAYVMLAESALSFLGIGI 249
           + +R   +VQAA+  GAS   ++  HIL   LP L   A+LD    +L  + L F+G+G 
Sbjct: 180 LVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGA 239

Query: 250 QPPEITWGLMISQGRQYLTNAWWLSFWPGLAIILTTLSLNLLSNWLRIALDP 301
           Q P   WG M++ GR Y+ + WW   +PG AI+LT +  NL  + +R  LDP
Sbjct: 240 QQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDP 291