Pairwise Alignments

Query, 315 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 286 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  176 bits (445), Expect = 8e-49
 Identities = 92/259 (35%), Positives = 149/259 (57%), Gaps = 5/259 (1%)

Query: 43  IFLILVIILAIIGPTLLNELATKQNLRGRNLAPFDFSREWFMWLGADALGRPLWPRIIVA 102
           + L L+ ++A+  P L       QN+  R   P         WLG D  GR L  R+I  
Sbjct: 28  VMLSLLTLIALFAPWLAPFDPYSQNVMHRLQPPGPEH-----WLGTDGFGRDLLSRVIYG 82

Query: 103 TQNTIMVAAGAVFISAVVGTLLGLIAGFSSQRTSQIIMRLADVIMSFPSLLVAVIVLYIL 162
           T+  +M+ A  + I+  +G L+G+ AG+      +++MRL D++++ P L++A+ ++ +L
Sbjct: 83  TRPALMMVALILVITIPIGLLIGVGAGYLGGWVDRLLMRLTDIMLALPGLVIALALVAVL 142

Query: 163 GSSILNLMLVLSITRIPVYLRTTRAEVMEIRSRMFVQAARVMGASSKRILFRHILPVVLP 222
           G+ +L+  L L++T  P + R  RAE M +R+  F+ AAR+ G    R+++ H+LP+ LP
Sbjct: 143 GAGLLHGALALALTAWPQFARQARAETMALRNSEFLAAARMQGIDGWRLMYGHVLPLCLP 202

Query: 223 TLTTLATLDFAYVMLAESALSFLGIGIQPPEITWGLMISQGRQYLTNAWWLSFWPGLAII 282
              T A +    ++LA + L FLG+G  PP   WG M+++G   +   WW++  PGLAI 
Sbjct: 203 GALTRAAMTPGNMILAAAGLGFLGVGAPPPMAEWGAMVAEGSSVMLEQWWVATMPGLAIF 262

Query: 283 LTTLSLNLLSNWLRIALDP 301
           LT+L+ NLL N LR  LDP
Sbjct: 263 LTSLTFNLLGNALRDKLDP 281